Transcript Information: R_Transcript_19656.p1


Annotated TAIR IDAT1G54490.1
Annotated Gene Nameexoribonuclease 4
Annotated Gene Symbol(s)AIN1, EIN5, XRN4, ATXRN4
Annotation TypeOrtholog
Chromosome Positionchr1:20350300-20356650 | Forward length=947
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5681093089133
Replicate 25.0940391305364
Replicate 36.8623559887208
Condition 2: 8 Hour
Replicate 15.1657942926678
Replicate 26.4629553000895
Replicate 38.7120072070423
Condition 3: 24 Hour
Replicate 18.5244178735779
Replicate 27.3982830455734
Replicate 38.6581110312094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19656.p1 GENE.R_Transcript_19656~~R_Transcript_19656.p1 ORF type:complete len:948 (+),score=168.31,XRN_N|PF03159.14|4.4e-96,zf-CCHC|PF00098.19|1.4e-06 R_Transcript_19656:251-3094(+)
ATGGGTGTTCCTGCATTTTATAGGTGGTTAGCAGATCGATACCCACTTGCAATTTCAGATGTAATTGAAGAAGAACCCCCAGTTGATATCTCAAGACCAAACCCTAATGGCATGGAATTTGATAATTTGTATTTGGATATGAATGGTATCATCCATCCTTGTTTTCACCCCGATGGAAAGCCTGCACCTGCAACATATGATGATGTGTTCAAGACAATCTTTGCCTACATTGATCATCTCTTGACATTAGTCCGCCCTAGGAAAATCCTCTTTCTGGCAATTGATGGAGTTGCACCAAGAGCTAAAATGAATCAGCAACGTTCACGACGCTTCCGAGCTGCAAAAGATGCTGCAGAGGCTGAAGCAGAGGAGGAAAAATTGAGGAAAGACTTTGAGGCCGAAGGAAGGTCTCTGGCTTCCAAAGATAGACCAAAAACGTGTGACTCGAATGTCATTACTCCAGGCACAGAGTTTATGTTTGTGCTCTCAGTGGCACTTCAGTATTACATGCAGAAGCGGTTGAACCATCATCCTGGCTGGCGAAGGATAAAGGTTATTCTGTCTGATGCCAATGTGCCTGGAGAAGGAGAGCATAAAATTATGTCATACATACGGTTGCAAAGAAACCTTCCCGGTTTTGATCCAAATACCCGACATTGTCTGTATGGTTTGGATGCTGATTTGATTATGTTGGCTTTAGCCACGCATGAGGTGCACTTCTCAATTCTGAGAGAGGTTGTTCTTCTGCCTTCACAGCAGGAGAAGTGTTTTCGTTGCGGTCAAGTTGGTCATCTGGCAGCTGATTGTCCAGGTAACACTGGTGGCCAAAATGAAAATTCAAATGGAAAGTTGGTAGATGATACCCCTATTTACAAGAAAAAATATCAGTTTCTGAACGTTTGGGTGCTGAGAGAATATTTGCAATTTGATCTGGAGATTCCCAATCCTCCTTTCAAGACCAACTTTGAGCGTTTGATTGATGATTTTGTGTTTCTTTGTTTCTTTGTTGGCAATGACTTCCTTCCGCATATGCCCACACTAGAAATACGAGAGGGTGCTATAAACTTACTGATGCATGTATACAGAAAAGAATTTACATCTATTGGTGGTTATCTTACTGATGCTGGGGAAGTCTTTCTGGATAGAGTTGAACATTTTGTTCAATCAGTTGCTGCTCATGAAGACCAGATCTTTCAAAAACGGGCCCGGATACAGCAGATAATTGAGAATAATGAAGGGATGAGGAACAAGGCGAAAAGAGAATCAAAAGACTCCTTTGAAGAGCCGCAACCTCCTGTGGAGGATAAGATCAAACTAGGGGAGCCTGGATATAAAGAGCGGTATTATTTGGAGAAATTTGGTGCATCAACGCCTGAAGAGATCGATAAAATAAAAAAAGAAGTGGTTTTGAAGTATGTAGAAGGTTTGTGCTGGGTTTGCCGTTATTACTACCAAGGTGTTTGCTCATGGCAATGGTTCTATCCGTATCATTATGCTCCATTTGCTTCTGATCTGAAAGATTTAGCTGATCTTGAAATTACATTTTTCTTGGGGGAGCCTTTTAAGCCGTTTGATCAACTGTTAGGAACTCTACCAGCAGCAAGTTCGGATGCATTGCCTGAGATGTACAGAAAGTTGATGACTGATCCTTCATCCCCCTTACTTGAGTTCTATCCTTCTGATTTTGAGATCGATATGAATGGTAAACGCTTCGCTTGGCAGGGAGTGGCCAAGCTGCCTTTTATTGATGAAAAGAAATTGCTTGCTGAAACAAAGAAGCTAGAGGAAACTTTGACGATAGAAGAGCAGCGACGGAACAGCATCATGCTTGATTTGTTGTATGTCCATCCTGCGCATCCTTTGGCTTCACAAATCTTGTCATATTACCATTTTTACTATCGTTTACCGTCTGAGCAAAGATATGCTTGGCCAATTGACAACAATGTTAGTGGTCAGATGAATGGATACCTTTGGTTATCCGAGAGGAATGGGCGGATGCAAGTGGTCCCTTCCCCTGTTGCTGGGTTACCAGACATTGTCAATAACCAAGCTTTAAACATAACATATCTGAATCCTCTGCCTCATAAGCACATCCCAGAACCTCCAAAAGGGGTGATCATGCCAGTAAAGATGGTAAATTATTCTGACGTGAAACCTTTTCCTGGATTATGGCATGAAGACAATGGCAATAGGCGACATGCTGCACGTGAACGGCCTCAAGTTCCAGGGGCGATATGTGGGCCTCAGTTGGGCCAAGCTGCTCATCGTCTTCTTAAGAACACTTTGAATATTAGACATAGTGATTCTTCTCCTGGGTGGTTAGACCATATGTCGTATCGAAATCATCCAGGCAACCATATGTTCAACAGGCTGAGGCCCGCTGGACCTGGTGGGTACGAGAGAGGTTACTATGATGATATGAATTACTATCACGGGCATCATCATGAGCCCCGTCCTGTGATGAATGACCCTAGGTCGCATTATGATATGCGTGGAAGCAGGCATAATGCTAGGGCAGACGACAGGTTATTATACAGAGATGAGAACCCTAAATTAGCGACAGCTATGTCAAATTTGTCGGTGGAAGGGATTAGGAACAGACCTCCGGTACAGATGAGACCGCGGGGACATAATCCTGGCATGCCTAATCCCCAACACGATTTTGTCCAGAATGGGGGTCAACTCCCAACACCGCCTGTTAAGTGGATAAATAGACCCGAAGCTGGATATAACATGAATTTGAGACAAGAGACATCACCCCAGATGCAGGTCAAGCAAGTTTATCAGGTTAAGACACAGAGACCTCCATCACTCTCAAATTCCGGAACAACACAGCGGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19656.p1 GENE.R_Transcript_19656~~R_Transcript_19656.p1 ORF type:complete len:948 (+),score=168.31,XRN_N|PF03159.14|4.4e-96,zf-CCHC|PF00098.19|1.4e-06 R_Transcript_19656:251-3094(+)
MGVPAFYRWLADRYPLAISDVIEEEPPVDISRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPATYDDVFKTIFAYIDHLLTLVRPRKILFLAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEEKLRKDFEAEGRSLASKDRPKTCDSNVITPGTEFMFVLSVALQYYMQKRLNHHPGWRRIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVVLLPSQQEKCFRCGQVGHLAADCPGNTGGQNENSNGKLVDDTPIYKKKYQFLNVWVLREYLQFDLEIPNPPFKTNFERLIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRKEFTSIGGYLTDAGEVFLDRVEHFVQSVAAHEDQIFQKRARIQQIIENNEGMRNKAKRESKDSFEEPQPPVEDKIKLGEPGYKERYYLEKFGASTPEEIDKIKKEVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLLGTLPAASSDALPEMYRKLMTDPSSPLLEFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAETKKLEETLTIEEQRRNSIMLDLLYVHPAHPLASQILSYYHFYYRLPSEQRYAWPIDNNVSGQMNGYLWLSERNGRMQVVPSPVAGLPDIVNNQALNITYLNPLPHKHIPEPPKGVIMPVKMVNYSDVKPFPGLWHEDNGNRRHAARERPQVPGAICGPQLGQAAHRLLKNTLNIRHSDSSPGWLDHMSYRNHPGNHMFNRLRPAGPGGYERGYYDDMNYYHGHHHEPRPVMNDPRSHYDMRGSRHNARADDRLLYRDENPKLATAMSNLSVEGIRNRPPVQMRPRGHNPGMPNPQHDFVQNGGQLPTPPVKWINRPEAGYNMNLRQETSPQMQVKQVYQVKTQRPPSLSNSGTTQRE*

Click here to download the sequence:
Link to NCBI Protein BLAST