Transcript Information: R_Transcript_196730.p1


Annotated TAIR IDAT1G19310.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6676424-6677104 | Reverse length=226
E-Value6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6697233629165
Replicate 28.1235686134487
Replicate 39.6808236269454
Condition 2: 8 Hour
Replicate 16.4129646290404
Replicate 27.3205267932453
Replicate 310.372348925935
Condition 3: 24 Hour
Replicate 16.6960271080804
Replicate 26.6953464489252
Replicate 39.5107288222828


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196730.p1 GENE.R_Transcript_196730~~R_Transcript_196730.p1 ORF type:internal len:168 (-),score=16.83,zf-C3HC4|PF00097.21|7.8e+03,zf-C3HC4|PF00097.21|2.2e-09,zf-C3HC4|PF00097.21|86,zf-C3HC4_3|PF13920.2|2.8e-08,zf-C3HC4_2|PF13923.2|1.9e-07,zf-RING_5|PF14634.2|7.5e-07,zf-RING_2|PF13639.2|6.9e-07,zf-RING_UBOX|PF13445.2|5e-06,zf-RING_UBOX|PF13445.2|54 R_Transcript_196730:3-503(-)
CTTAATCTGATTTTCCCCCACTTTTCTTGGCTTATCCTCAAATCTTTTAACAAGATCAAATCTTTCCCATTTCATAATCTTACCCATTTGATATTTTCTCTCTTGAGCACCTCCATTGTTGAAATTACAGGGATGGACTTGATTCAGAACTTCCAACACTCTGTCGCCGAACACTGCTCTAATGAAGATGTCTCAGTGAAGCAGAAATTTAACTCTTTGTTGACTCAAACCACAGCATCAGAGAGCAATGGCTCTTTTGATTGCAATATATGCTTTGATTCAGCACATGAACCTGTGGTCACACTCTGTGGTCATCTATATTGCTGGCCATGCATTTTCAAGTGGCTTCATGTCCAAAGCTCCTCTGAACCTGTACAACCGCAATCTTGCCCTGTTTGTAAGGCAAAAATCTCGCAATCTTCATTAATCCCGCTTCACTGCCATGCTCCTCGTACTGAATCTGAGGTCAGGAAGCCTCACTTTGACGTCATCCCTCCTAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196730.p1 GENE.R_Transcript_196730~~R_Transcript_196730.p1 ORF type:internal len:168 (-),score=16.83,zf-C3HC4|PF00097.21|7.8e+03,zf-C3HC4|PF00097.21|2.2e-09,zf-C3HC4|PF00097.21|86,zf-C3HC4_3|PF13920.2|2.8e-08,zf-C3HC4_2|PF13923.2|1.9e-07,zf-RING_5|PF14634.2|7.5e-07,zf-RING_2|PF13639.2|6.9e-07,zf-RING_UBOX|PF13445.2|5e-06,zf-RING_UBOX|PF13445.2|54 R_Transcript_196730:3-503(-)
LNLIFPHFSWLILKSFNKIKSFPFHNLTHLIFSLLSTSIVEITGMDLIQNFQHSVAEHCSNEDVSVKQKFNSLLTQTTASESNGSFDCNICFDSAHEPVVTLCGHLYCWPCIFKWLHVQSSSEPVQPQSCPVCKAKISQSSLIPLHCHAPRTESEVRKPHFDVIPPR

Click here to download the sequence:
Link to NCBI Protein BLAST