Transcript Information: R_Transcript_196751.p1


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value6.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7315884372012
Replicate 22.5314688445182
Replicate 33.2491826377521
Condition 2: 8 Hour
Replicate 126.743426963658
Replicate 222.360881841186
Replicate 336.818160549154
Condition 3: 24 Hour
Replicate 15.0474611635378
Replicate 24.5361879987712
Replicate 35.7435820809589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196751.p1 GENE.R_Transcript_196751~~R_Transcript_196751.p1 ORF type:complete len:141 (+),score=36.00,Cornifin|PF02389.11|6.8e-06 R_Transcript_196751:72-494(+)
ATGGCTTTTCACTTGTTTCTATTCGGTGTGATGGTCGTTGCCTGCATGATGAGTGCTATCATGATGCCAGTGTCTGCTCGCCTCCTTCTGGAAACATCCTTGCCCGAGCTTCCAAAGCCAGAGCTGCCAAAGTTTCCTGAGTTGCCAAAGCCAGCAATGCCTGAACTTCCTAAGCCTACAATTCCTGAGATACCCAAACCAAAATTGCCCGAGTTGCCAAAGCCCACAGTTCCGGAACATCCCAAGCCCACATTGCCCGAGCTTCCTAAGCCTGCAGTCCCTGAGGTTCCTAAGCCCACATTGCCTGAGTTGCCAAAGTCAGCAGTTCCTGAACTTCCCAAGGCTAGTGAGCATGAATTGCCCAAACCTACACTTCCTCAAGTGCCTAAGCCGGCTCTTCCTGACGTCCCAAGCAAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196751.p1 GENE.R_Transcript_196751~~R_Transcript_196751.p1 ORF type:complete len:141 (+),score=36.00,Cornifin|PF02389.11|6.8e-06 R_Transcript_196751:72-494(+)
MAFHLFLFGVMVVACMMSAIMMPVSARLLLETSLPELPKPELPKFPELPKPAMPELPKPTIPEIPKPKLPELPKPTVPEHPKPTLPELPKPAVPEVPKPTLPELPKSAVPELPKASEHELPKPTLPQVPKPALPDVPSKP*

Click here to download the sequence:
Link to NCBI Protein BLAST