Transcript Information: R_Transcript_196865.p1


Annotated TAIR IDAT1G77405.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29087145-29088521 | Forward length=458
E-Value6.5E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94129619273213
Replicate 20.47076906763
Replicate 30.41088318558121
Condition 2: 8 Hour
Replicate 10.54901042482613
Replicate 20.80218410192594
Replicate 30.77327489189989
Condition 3: 24 Hour
Replicate 10.97802317786183
Replicate 20.29670751870732
Replicate 31.030586991984


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196865.p1 GENE.R_Transcript_196865~~R_Transcript_196865.p1 ORF type:complete len:446 (+),score=60.79,PPR_2|PF13041.2|8.7e+03,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|8.5e-05,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|5.7e-12,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.00043,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.012,PPR|PF01535.16|0.00055,PPR|PF01535.16|1.4,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|0.051,PPR|PF01535.16|0.095,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|32,PPR_3|PF13812.2|5.3 R_Transcript_196865:93-1430(+)
ATGTTCTCAACAAGACCTCTCCTCTACCACCACCGTTTCCCACTAGTCAACCAAATCCTCGCCGCCATGATCCGTGGTTGCCCTCTCGATACCGCCACCATCTCCACCCCGTGGACTCCGGAAACAGTGTCTGAGGTCCTTCGCTCCATCCCCACCTTCTTCTTCTTACCCACCCGCTCCATTGGCCGCCAACCCAACCCGATCCGCCACCGTGCCCCACTTAAACAGCGCAACCTCCGTCTTGAATCTGAAAAGCTCCGAAATGGGTCCCTCATTTTGGGCCCTGCAGCCCACCGTGACCCGGCCCGGGTTGATTTTGGGGTGTCCATGACCAAACAATTCTTCTACTGGGTTGAATCCCATCATGGGTTTACCCACAATGAGATTACTGTGAAAGAGATGGCTATTATCTTGGCTAAGTCCAATAAGCTACATGATTTGTGGGATTTTCTTAAGGAGATGAGTAAGAGAGAAAATGGGCTTGTTACTACAATGTCTATCACCTGTTTGATAAAATGCCTAGGTGAAGAAGGCCTTGTGAATGAGGCTATGCATGCTTTCTATAGAATGAAGCAGTTTCATTGTAAGCCTGATGTTTATGCTTATAATACAATCATTCTTGCTCTTTGTAGAGTTGGGTTCTTTAAAAAGGCTAAGTTTTTGCTTCAACAAATGGAGTTACCAGGGTTTAGATGCCCACCTGATGTGTATACTTATACAATTTTGATTAGTTCTTATTGTAAGTATAGTATGCAGACTGGGTGTAAGAAGGCGATTCGTAGGAGGTTGTGGGAGGCGAATCATTTGTTCCGGTTGATGTTGTTTAAGGGTTTTGTTCCGGATATTGTAACCTATAATAGCTTGATTGATGGATGTTGTGAGACTTACAGGATTGAGAGAGCTTTGGAGCTCTTCGAGGATATGGAGAAAAGGGGTTGTGCTCCGAATAGAGTTGCATATGATTCTATAATTAGGTACTATAGTGTGGGGAATGAGATTGATAAGGCCATTAACATGTTGAGGAGAATGAGGGAAATGGATCATGGAACGCCCACTACAAGTTCATATACGCCTATCATTCATGCTTTGTGTGAAGTGGGGAGGGTGGTTGAGGCTCGGGATTTTGTTGTTGAGTTGGTGGAGGGAGGATCAATTCCTAGGGAATATACATACAAGTTGGTCTGTGATTCCCTACATGCCAAGGGAAAGTCTGATCTGCTAGATGAAGAAACACGTCGAAAAATTGAAGATGGCGTAGTAGCTAGATATAGGCAAAAACAGAAAGTTAAACCTGTGATGAACCGAAAAAATTCTGTTCTTGCCATTGAAGAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196865.p1 GENE.R_Transcript_196865~~R_Transcript_196865.p1 ORF type:complete len:446 (+),score=60.79,PPR_2|PF13041.2|8.7e+03,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|4.6e-16,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|8.5e-05,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|5.7e-12,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.00043,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.012,PPR|PF01535.16|0.00055,PPR|PF01535.16|1.4,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|0.051,PPR|PF01535.16|0.095,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|32,PPR_3|PF13812.2|5.3 R_Transcript_196865:93-1430(+)
MFSTRPLLYHHRFPLVNQILAAMIRGCPLDTATISTPWTPETVSEVLRSIPTFFFLPTRSIGRQPNPIRHRAPLKQRNLRLESEKLRNGSLILGPAAHRDPARVDFGVSMTKQFFYWVESHHGFTHNEITVKEMAIILAKSNKLHDLWDFLKEMSKRENGLVTTMSITCLIKCLGEEGLVNEAMHAFYRMKQFHCKPDVYAYNTIILALCRVGFFKKAKFLLQQMELPGFRCPPDVYTYTILISSYCKYSMQTGCKKAIRRRLWEANHLFRLMLFKGFVPDIVTYNSLIDGCCETYRIERALELFEDMEKRGCAPNRVAYDSIIRYYSVGNEIDKAINMLRRMREMDHGTPTTSSYTPIIHALCEVGRVVEARDFVVELVEGGSIPREYTYKLVCDSLHAKGKSDLLDEETRRKIEDGVVARYRQKQKVKPVMNRKNSVLAIEEY*

Click here to download the sequence:
Link to NCBI Protein BLAST