Transcript Information: R_Transcript_196917.p1


Annotated TAIR IDAT3G22380.2
Annotated Gene Nametime for coffee
Annotated Gene Symbol(s)TIC
Annotation TypeHomolog
Chromosome Positionchr3:7913181-7918967 | Forward length=1555
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62941244671444
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.56289344706311
Replicate 20.12851081517923
Replicate 30.20863920253318
Condition 3: 24 Hour
Replicate 10.65970710424437
Replicate 20.2535087228802
Replicate 30.12579140624654


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196917.p1 GENE.R_Transcript_196917~~R_Transcript_196917.p1 ORF type:5prime_partial len:174 (+),score=15.83 R_Transcript_196917:1-522(+)
CCCCAGAATACCACCTCTTCAGCTTCTCCTTTCACTACCGTTGCTCCTAAGAGAAAACGGCCACGCCCGTACCCGGATGAAAATCCTCGGAGCAGCCCCATTTCGAAACCGGAAATAGATCAACCCGTTAAACCAGAGGCATCGTTGCCGGGATCTGCGGTGGAAAACGGCGATTTGCTGAAGTCTAATGATCCCACTCCACCTTTAGAGCCGGTGGCGAACGGTGTAAGTTCATCGGATGCGAAACCGGTGGTAATGGAAGAATCAGTGGGAATGGTTGCTAAAGTGGAGGAAGCTTCGTCCACATCCCCTAATACAGAATCACAGGATCACCATCATGTGGAATCCGCATCTACATCCACTAAACCAACCTCAACTCTTGGTGGTGAGAAGGAGACGCATAGAGAAGAGAAGTTCGAGATAGATCTCATGGTTACGATCTGCAAATTCAGCTTCTTTTTCCTTTTTTTTTTTTTGTGTGGCTCTCATAATTTCGACCTCTTTTCTGAATTCTTCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196917.p1 GENE.R_Transcript_196917~~R_Transcript_196917.p1 ORF type:5prime_partial len:174 (+),score=15.83 R_Transcript_196917:1-522(+)
PQNTTSSASPFTTVAPKRKRPRPYPDENPRSSPISKPEIDQPVKPEASLPGSAVENGDLLKSNDPTPPLEPVANGVSSSDAKPVVMEESVGMVAKVEEASSTSPNTESQDHHHVESASTSTKPTSTLGGEKETHREEKFEIDLMVTICKFSFFFLFFFLCGSHNFDLFSEFFD*

Click here to download the sequence:
Link to NCBI Protein BLAST