Transcript Information: R_Transcript_196931.p1


Annotated TAIR IDAT4G20190.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10906508-10907677 | Reverse length=389
E-Value4.7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8861392986543
Replicate 22.0296423735755
Replicate 31.298048463782
Condition 2: 8 Hour
Replicate 10.6529563985932
Replicate 20.44721763682371
Replicate 30.30252684367312
Condition 3: 24 Hour
Replicate 10.76526024092347
Replicate 20.5146227074468
Replicate 30.43775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_196931.p1 GENE.R_Transcript_196931~~R_Transcript_196931.p1 ORF type:5prime_partial len:300 (+),score=57.37 R_Transcript_196931:1-900(+)
CTGATATCCTCTCCTACAAATAATAATAATAATGGGTCGACCCAAATTGCTCAACCTCCCTTACGCCCACCTACCAAGCTCAAGTTTGTAAGTGCGAGTGCCTCCTCCTCGCCACAAAGTGGCTCAAATAAGTACAAATATGATGATCATCATCATCAGCAACAAAGCAAACTTGTACTATCACGAATGCCATCTACAAGAATGATGGACGAGAGTCAATATGCAGGCAGCAGAGAGTCAGACAGCAGGAAAACCAAGTCATTTTGGGAAGCGAGATTCAGTACTGCCACAGATGACTTTGATCTATGGCTCGAAAAGCCAAACAAGTCAAGACCATCAAACAAGTTGTCAAAACCACCACTTGGTCCGCCCACTAGTACAAATGCTTATCAGGACCAGATGAGAAAGACCAAAAGCAGAGATCGCGGCCATAGTAATAATAATTATCGTCTAGATCATGAAAATGAAGAGCGGTTTAAATGCGGGAAGTTGTGTATATTTCTTCCAAGGGCGGGTAAAGGGAAGCCTGTAAGGTCAAGCTCAACAGCTTCAACAGCAACAACACATGACTCAATATTGTCTCAAGGACCAACAGCTATATCAAGGAGGGTTTCCTTGGAAAAGTTTGAGTGCGGGTCTTGGTCTGACAATGACAATGAAGGGGATCAGCCAAATCTCTTCTTTGATCTCCCAATGGAGCTCCTCAGATGTAGTGTTAGCGACATGCAATCCCCTGTAACTGCAGCTTTTGTGTTCGACAATGATGATGATGATGATGATAAACAGACCATAACCAATGCAAATCCTAGCAAATTTCAAGATTCAACATCATCATCATCATCGCCTATGCTTCAAGCAAGGGCTGACTTAGACGCCTTTCTAGAAGCACAGAGTAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_196931.p1 GENE.R_Transcript_196931~~R_Transcript_196931.p1 ORF type:5prime_partial len:300 (+),score=57.37 R_Transcript_196931:1-900(+)
LISSPTNNNNNGSTQIAQPPLRPPTKLKFVSASASSSPQSGSNKYKYDDHHHQQQSKLVLSRMPSTRMMDESQYAGSRESDSRKTKSFWEARFSTATDDFDLWLEKPNKSRPSNKLSKPPLGPPTSTNAYQDQMRKTKSRDRGHSNNNYRLDHENEERFKCGKLCIFLPRAGKGKPVRSSSTASTATTHDSILSQGPTAISRRVSLEKFECGSWSDNDNEGDQPNLFFDLPMELLRCSVSDMQSPVTAAFVFDNDDDDDDKQTITNANPSKFQDSTSSSSSPMLQARADLDAFLEAQSS*

Click here to download the sequence:
Link to NCBI Protein BLAST