Transcript Information: R_Transcript_197040.p1


Annotated TAIR IDAT4G17750.1
Annotated Gene Nameheat shock factor 1
Annotated Gene Symbol(s)HSF1, HSFA1A, ATHSF1, ATHSFA1A
Annotation TypeOrtholog
Chromosome Positionchr4:9869969-9871603 | Reverse length=495
E-Value3.8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1722085016792
Replicate 21.0273419163938
Replicate 30.56040948247468
Condition 2: 8 Hour
Replicate 10.074880320939588
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197040.p1 GENE.R_Transcript_197040~~R_Transcript_197040.p1 ORF type:5prime_partial len:327 (+),score=76.48,RRM_1|PF00076.18|7.6e-09,RRM_1|PF00076.18|1.2e-16,RRM_1|PF00076.18|2.6e-11,RRM_6|PF14259.2|0.0055,RRM_6|PF14259.2|5.9e-10,RRM_6|PF14259.2|1.4e-06,RRM_5|PF13893.2|0.067,RRM_5|PF13893.2|0.0058,RRM_5|PF13893.2|0.0044 R_Transcript_197040:2-982(+)
AGAAACGGAAGAAGCAAGGGTTACGGATTCGTTGAGTTCAACAACAAGGACGAATTGGAAAAGGCAGTCAAGTTGAATGGAACTACCGTCTCTGGAAGACAAATCATTGTCCAAGTTTCCGTCAAGAGAACCAGCACCCCAAATAACAACAACAGAAGAAACAATAACAACAACAACAATGGAGGAAACTTCAATGTTGTTAGAAGAACTGAGAGAAGAAGCGAGAACACCCTCTACATCTCCAACTTGCCTTTTGAATTGGATGATAATGATTTGAAGCAAATCTTCCAAGAGTTCCAACCTAAGAACGCTCAAATCCCATTGAGAAGAAACGGAAAGAGCAGAGGATACGGATTCGTCGAATTCTCCAATGCAAAGGACCAAAATGCTGCTTTGACTGCTCTCGATCAATCTGAGGTCAATGGACGTGTTGTCACCATCAAGGTTTCCAGCCCAAATGCTAACAATAACAACAATAACAACAGAGTCACTGTCAACAGAAGAAACAACAACAATAACAACAGAGGAAACAACAACAGAAACAATAACAACAATAACAACAACAACAACAACAATAGAGGAAACAACAACAGCAACAGAGGAAACAACAACAACAACAACAGAGGAAACAATAACAACAACAACAACAATAACAACAATAACAACAACAACAACAACAACAGAAGACAACAAAACAGACAACCAAGAGAGAACAGAGAAGTCTCCACCAACTTGGTTTATGTTTCCAACCTCCCTTTCAACTTGGAGGATAATGGTCTTGGAGAGATCTTCAAGGGACTCAAGGTCAACAAGGCATACGTTGCAAGAAGAAGAAACGGTTACAGCAAGGGATTCGGGTTTGTTGAGTTTGCAACCACTGAAGACCAACAAAGCGCACTCAAGCAAAACGGAAGTGAAGTGAGTGGAAGACCAATCGTTGTCCAAGCTGCATTCAAGGTTGATGAGAACAAGACCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197040.p1 GENE.R_Transcript_197040~~R_Transcript_197040.p1 ORF type:5prime_partial len:327 (+),score=76.48,RRM_1|PF00076.18|7.6e-09,RRM_1|PF00076.18|1.2e-16,RRM_1|PF00076.18|2.6e-11,RRM_6|PF14259.2|0.0055,RRM_6|PF14259.2|5.9e-10,RRM_6|PF14259.2|1.4e-06,RRM_5|PF13893.2|0.067,RRM_5|PF13893.2|0.0058,RRM_5|PF13893.2|0.0044 R_Transcript_197040:2-982(+)
RNGRSKGYGFVEFNNKDELEKAVKLNGTTVSGRQIIVQVSVKRTSTPNNNNRRNNNNNNNGGNFNVVRRTERRSENTLYISNLPFELDDNDLKQIFQEFQPKNAQIPLRRNGKSRGYGFVEFSNAKDQNAALTALDQSEVNGRVVTIKVSSPNANNNNNNNRVTVNRRNNNNNNRGNNNRNNNNNNNNNNNNRGNNNSNRGNNNNNNRGNNNNNNNNNNNNNNNNNNRRQQNRQPRENREVSTNLVYVSNLPFNLEDNGLGEIFKGLKVNKAYVARRRNGYSKGFGFVEFATTEDQQSALKQNGSEVSGRPIVVQAAFKVDENKTN*

Click here to download the sequence:
Link to NCBI Protein BLAST