Transcript Information: R_Transcript_197041.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48034107775576
Replicate 20.44202737718522
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.11608030995041
Replicate 30.11519844572051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197041.p1 GENE.R_Transcript_197041~~R_Transcript_197041.p1 ORF type:5prime_partial len:190 (+),score=43.01,RRM_1|PF00076.18|3.4e-09,RRM_1|PF00076.18|9.5e-12,RRM_6|PF14259.2|0.0025,RRM_6|PF14259.2|5.1e-07,RRM_5|PF13893.2|0.03,RRM_5|PF13893.2|0.002 R_Transcript_197041:2-571(+)
AGAAACGGAAGAAGCAAGGGTTACGGATTCGTTGAGTTCAACAACAAGGACGAATTGGAAAAGGCAGTCAAGTTGAATGGAACTACCGTCTCTGGAAGACAAATCATTGTCCAAGTTTCCGTCAAGAGAACCAGCACCCCAAATAACAACAACAGAAGAAACAATAACAACAACAACAATGGAGGAAACAACAGAAGACAAAACAGAAACAGCACCAGAAGAACTGGAGGAAACAACAACAACAACAATGGAAACAATAACAACAACAACAGAAGACAACAAAACAGACAACCAAGAGAGAACAGAGAAGTCTCCACCAACTTGGTTTATGTTTCCAACCTCCCTTTCAACTTGGAGGATAATGGTCTTGGAGAGATCTTCAAGGGACTCAAGGTCAACAAGGCATACGTTGCAAGAAGAAGAAACGGTTACAGCAAGGGATTCGGGTTTGTTGAGTTTGCAACCACTGAAGACCAACAAAGCGCACTCAAGCAAAACGGAAGTGAAGTGAGTGGAAGACCAATCGTTGTCCAAGCTGCATTCAAGGTTGATGAGAACAAGACCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197041.p1 GENE.R_Transcript_197041~~R_Transcript_197041.p1 ORF type:5prime_partial len:190 (+),score=43.01,RRM_1|PF00076.18|3.4e-09,RRM_1|PF00076.18|9.5e-12,RRM_6|PF14259.2|0.0025,RRM_6|PF14259.2|5.1e-07,RRM_5|PF13893.2|0.03,RRM_5|PF13893.2|0.002 R_Transcript_197041:2-571(+)
RNGRSKGYGFVEFNNKDELEKAVKLNGTTVSGRQIIVQVSVKRTSTPNNNNRRNNNNNNNGGNNRRQNRNSTRRTGGNNNNNNGNNNNNNRRQQNRQPRENREVSTNLVYVSNLPFNLEDNGLGEIFKGLKVNKAYVARRRNGYSKGFGFVEFATTEDQQSALKQNGSEVSGRPIVVQAAFKVDENKTN*

Click here to download the sequence:
Link to NCBI Protein BLAST