Transcript Information: R_Transcript_197152.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value8.1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.47360076126988
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.13647827534126
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197152.p1 GENE.R_Transcript_197152~~R_Transcript_197152.p1 ORF type:3prime_partial len:133 (+),score=35.48,MatE|PF01554.14|2.3e-16 R_Transcript_197152:161-556(+)
ATGGAGGAAAAGAAGGCAATAGAAATCGAGCACCAAAATAGCAAGATTGAGAGTGTTATTATTAGTAATAATAATAGTAATATTATTAGTAATAGTGAAAGAAGAAAAAAAGTGGGGAAAATGAAAAAGATTTGGAAAGAATCAAAGAAGATGTGGGAAATAGCAGGGCCTGCAATATTGTGTGAAGTGTCACAGTTCTCAATTGTGTTTGTGACTGCTGCCTTTGTTGGGCATCTGGGTGATCTTCAGCTTGCTGCTGTTTCTGTTGTCTCCAATGTTGTTGAAGGTTTTGTTTTTGGAATCATGCTAGGGATGGGAAGTGCACTAGAGACACTATGTGGACAAGCAGTTGGTGCTGGACAGACAAACATGTTAGGAATTTACATGCAAAGATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197152.p1 GENE.R_Transcript_197152~~R_Transcript_197152.p1 ORF type:3prime_partial len:133 (+),score=35.48,MatE|PF01554.14|2.3e-16 R_Transcript_197152:161-556(+)
MEEKKAIEIEHQNSKIESVIISNNNSNIISNSERRKKVGKMKKIWKESKKMWEIAGPAILCEVSQFSIVFVTAAFVGHLGDLQLAAVSVVSNVVEGFVFGIMLGMGSALETLCGQAVGAGQTNMLGIYMQRS

Click here to download the sequence:
Link to NCBI Protein BLAST