Transcript Information: R_Transcript_197191.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4205751372055
Replicate 20.27414524353077
Replicate 30.28149600732599
Condition 2: 8 Hour
Replicate 10.24448252251474
Replicate 20.30913661531593
Replicate 30.39035721764273
Condition 3: 24 Hour
Replicate 10.44081811113103
Replicate 20.33879045914865
Replicate 30.52113582587851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197191.p1 GENE.R_Transcript_197191~~R_Transcript_197191.p1 ORF type:internal len:1302 (+),score=108.53,RVT_1|PF00078.23|4e-28,RVP|PF00077.16|2.7e-06,zf-CCHC|PF00098.19|1.8e-05 R_Transcript_197191:2-3904(+)
AGACAAGTCGACTCATTAGTTAAACCAGAAGACAAAAAGACAGAAGAAAATATAAATGATGTTACAAAAGAATTTTCAAAATTTACTTTGCAAAACGATGGGAAGAAAATTTCTACTTCTTCTTCATCTACTTCTTCTTTTACCACTGTTTCGAGACCAGTTTTTCAAGTTCAATTACCACCCTTGTTAGCCAGAATAGATGAGAAATTAACAGAACTAGATAAAGATAAGGGAAAGTCTTCTATTACGTGTTTAGACAACAACTGTCAAACTGATTCAGAAGAAGAATCAGAGGACATCCAAGAAGTAAATAAAATCCAAAGAGGAAATCCCGGACCTTCGAGGTCCTCTTGGCAAAATATTTCAACTAGGAATTATTATCCTAGACCTACTCCTCCTAATATTCAATATGAAGAAAGAAAAGAGTTTAGGGCAGAAGGATATGATGGATCCGCTATATATGAATGGAATATAGATGGAAAATCAGAGTATGAGATACTCAACACTCTTCAAGAAATGAATATAGCAGTTCAAGCTTACTACACTAGGAATATCAAGGACGGAAAAGAGATAATGAATAGATTAGTTAGAGGTTTCACTGGACAGCTTAGGTATTGGTGGGACAATTTCCTAACTAGTCAAGAAAAGAGTGATTTAGTAAACCACACTACTCAAGAGAATATAGAGATAATAACCTCAGAAGGACAAAGACAGATTAAGACTGAGGTTAGATCAGACGCTCCAGAAGTCCTTATCCATGCGATTAGTTTGAATTTTGTAGGAAATCCAGACCAGATAATGGATTCTTCCCAGATTCTTTTAACAAAATTAAATTGTCCAACTTTAAACGATTATCGTTGGTATAAGGATGTTTTTATAACAAATCTCATGAGAAGGCAGGATGCTAGAGCTACTTTTTGGAAAGAAAAGTTTATTTCAGGATTACCAAACTTATTTTCAAAAAGACTTATTCAAAAACTCCAAGATAAGACAGGATCCACAGAAATCCCGTGGAATGAATTGTCTTGGGGAAATATATTTTTATTTGTTCAAAATGAAGGATTAAGTCTATGTACGGAATTACAAATTCAAAAGAAATATTTATCCGAAAAAGCTCAATATAGAAGAGAACTAGGATCTTTTTGTGAGGCTTTTGGTCTTAAAAAGATTCAAGCTCCTTCAACTGTCAGTAAAAAGCAATATTCAAAATTTTCCAGAAAAAATCAACGATTTTACAAAAAGAAAATGCCAAGTAATCCAGAAGCTTTGCCAAAGCATCGGACAAGGCCCTCTTTCAAGAAAAAGAGAAATGAATTTACAAAGAAAATAGTTTGCTTCAAGTGTAGGCAACCTGGACACAAAGCTAATGAATGTCCAGTTAAAAATAGGATTTCAGAAATTTGTGGAGACAATCCTGATATGCAAGAAAAGATTTTGCAACTTTTTAATGTCAAAGATTCTGAAGAATCTGATAATGATATGATATGCCAGATAAATTCTGACGAGGATTCATACCAAGAGGATACATCAGATTCAGAAGGAAATTTCTTTTTGAATACAATAACTAAAGAAAAGGACGAAAAGGAATTTCTATTCAAAGTTATTTCTCAAATTACAGATCCAGAATTACAAAAGGATTATTTAGAACAGCTAAAAGGTTTAATGATTAAGGAAGAAAATGTTTCATATCCAGAACCCAAAAGTATTTCTCAGATTTTCAAAAAATATCCTACTCCTGATCCTTTCAAACAAATTACTACGAAGGAACTTCAAACAGAAGTAAACCTTCTTAAAACTCAAATTAAAGAATTATCAACTCAGGTTTTACAACTTCAAGAAAAGGATATTTTATTGGAGGCAAAACTATCTCTTTTAGAAGCAAAAGGAGATAAACCTTCTTCTTCTCAAGAGATTGTAACTAATGATAATCTTTTAATTAATGATTTAGATAAAAATATTTTAGATCAAGATAGTATTAATATTTTAGATAAGATTAATTTTCAAAAATGGTATATAAAGGTGACTATTTCAGTGAAAGATTTTGTAATCAATACGGTTGCATTATTAGATAGTGGAGCGGATCAGAATTGTATGAAGGAAGGATTAATCCCTAAGCAGTTCTGTGAACCCACTGGAGAAAAGATCTATGGTGCAAACGGTGCAAGATTACAAGTTAAGCAAAAGGTTTCAAAAGCTTTTGTCCATAATCAAAATTATCATTTCAAGACCCCGTTTCTGTTAATCAAGAACATTAATCAACAAGTTATTTTGGGAACCCCGTTTATAACTCAAATCTATCCCTTTCAAGTAGATAACATCGGAATTCATACTAATATTTTTGGAAAAAGATTGTCATTCGAGTTTCTTTCTCCAGTATGCCAGAAAGAAATAATGATTCTCCAAAATTACACTATATTCAAAAATTTGAATCTAATCTCTAATAAAAAGAGTCAATTGAATTTCTTAACCAAAGAGATTTCTTATTCAAAAATAGAAGATCAATTGGCAAGATCTTCGCTACAATTAAAAATCTTGGATTTACAAAAGTTATTCGAAAAAGAAGTATGCTCAGATCATCCCAACGCCTTCTGGGATAGAAAGAAATATATAGTTTATTTGCCCTATGAAAAAGATTTTCTAGAGAGTAATATTCCTACTAAGGCAAGACCTATTCAAATGAACCTAGAACTTTTAGAATTTTGCAAAAATGAAATCCAAAGCCTTTTGGATAAAAAATTAATTCGTCATTCAAAATCTCCATGGAGTTGTCCAGCTTTTTATGTCATGAACCAAGCTGAAAAGGAACGAGGCGTTCCAAGGCTTGTTATCAATTATAAACCATTAAACAAGGTTTTACAATGGATTAGGTATCCCATACCTAATAAAAAAGATTTATTATCAAGATTATATGATGCTAAAGTATTCTCAAAATTTGATATGAAAAGTGGTTATTGGCAAATCCAGATTGCGGAACAAGATAGGTATAAAACTGCATTCACAGTGCCATTTGGACACTATGAATGGAACGTTATGCCATTTGGATTAAAGAATGCCCCTTCAGAATTCCAGAATATTATGAATGATATTTTTAATCCTTATACTCAATTTTCTATAGTTTATATAGATGATGTTTTAATCTTCTCTCAAAATATCGAACAACATTTTAAATATTTAAATATCTTTTTACATATAATCAAGAAAAACGGTTTAGTGGTCTCAGCACCAAAGATGAAAATTTTTCAAACTAAAGTAAGATTTTTAGGACACAACATATATCAAGGAACTATCAAACCTATTGATAGAGCTATAGATTTTGCAAATAGATTCCCAGATGAAATTAAAGACCAAAATCAATTGCAAAGATTTTTAGGATGTTTAAATTATGTTTCTGATTTCTTTCCAGATTTAAGACGAATTTGTGCTCCTCTGTATCAAAGATTAAGGAAAACTCCAAAACCATGGTCAGAATTGCATACGCAACTAGTAAGAAAACTTAAAGAAAAGGTCAAGAGTCTTCCATGTCTAGGTATTCCACATCCACATGCATTCATGATAGTAGAAACTGATGCTTCCAATTTAGGATACGGAGGTATTCTGAAACAAAAAATAGAAGAGTCTAGTTCAGAACAATTAGTCAGATTTCATTCAGGTTTATGGCTCGGACCTCAAATGAATTACTCAACTATCAAAAAGGAAATTTTATCAATTGTTTTATGTATTTCAAAATTTCAAGATGATCTCTTTAATAAAAAATTTTTGTTAAGGATAGATTGTAAATCTGCAAAAGAAGTTTTACAAAAAGATGTTCAAAATCTTGTTTCAAAACAAATATTTGCAAGATGGCAAGCTATATTGTCTGTTTTTGATTTCGATATAGAATTTATCAAGGGAGAAAAGAATTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197191.p1 GENE.R_Transcript_197191~~R_Transcript_197191.p1 ORF type:internal len:1302 (+),score=108.53,RVT_1|PF00078.23|4e-28,RVP|PF00077.16|2.7e-06,zf-CCHC|PF00098.19|1.8e-05 R_Transcript_197191:2-3904(+)
RQVDSLVKPEDKKTEENINDVTKEFSKFTLQNDGKKISTSSSSTSSFTTVSRPVFQVQLPPLLARIDEKLTELDKDKGKSSITCLDNNCQTDSEEESEDIQEVNKIQRGNPGPSRSSWQNISTRNYYPRPTPPNIQYEERKEFRAEGYDGSAIYEWNIDGKSEYEILNTLQEMNIAVQAYYTRNIKDGKEIMNRLVRGFTGQLRYWWDNFLTSQEKSDLVNHTTQENIEIITSEGQRQIKTEVRSDAPEVLIHAISLNFVGNPDQIMDSSQILLTKLNCPTLNDYRWYKDVFITNLMRRQDARATFWKEKFISGLPNLFSKRLIQKLQDKTGSTEIPWNELSWGNIFLFVQNEGLSLCTELQIQKKYLSEKAQYRRELGSFCEAFGLKKIQAPSTVSKKQYSKFSRKNQRFYKKKMPSNPEALPKHRTRPSFKKKRNEFTKKIVCFKCRQPGHKANECPVKNRISEICGDNPDMQEKILQLFNVKDSEESDNDMICQINSDEDSYQEDTSDSEGNFFLNTITKEKDEKEFLFKVISQITDPELQKDYLEQLKGLMIKEENVSYPEPKSISQIFKKYPTPDPFKQITTKELQTEVNLLKTQIKELSTQVLQLQEKDILLEAKLSLLEAKGDKPSSSQEIVTNDNLLINDLDKNILDQDSINILDKINFQKWYIKVTISVKDFVINTVALLDSGADQNCMKEGLIPKQFCEPTGEKIYGANGARLQVKQKVSKAFVHNQNYHFKTPFLLIKNINQQVILGTPFITQIYPFQVDNIGIHTNIFGKRLSFEFLSPVCQKEIMILQNYTIFKNLNLISNKKSQLNFLTKEISYSKIEDQLARSSLQLKILDLQKLFEKEVCSDHPNAFWDRKKYIVYLPYEKDFLESNIPTKARPIQMNLELLEFCKNEIQSLLDKKLIRHSKSPWSCPAFYVMNQAEKERGVPRLVINYKPLNKVLQWIRYPIPNKKDLLSRLYDAKVFSKFDMKSGYWQIQIAEQDRYKTAFTVPFGHYEWNVMPFGLKNAPSEFQNIMNDIFNPYTQFSIVYIDDVLIFSQNIEQHFKYLNIFLHIIKKNGLVVSAPKMKIFQTKVRFLGHNIYQGTIKPIDRAIDFANRFPDEIKDQNQLQRFLGCLNYVSDFFPDLRRICAPLYQRLRKTPKPWSELHTQLVRKLKEKVKSLPCLGIPHPHAFMIVETDASNLGYGGILKQKIEESSSEQLVRFHSGLWLGPQMNYSTIKKEILSIVLCISKFQDDLFNKKFLLRIDCKSAKEVLQKDVQNLVSKQIFARWQAILSVFDFDIEFIKGEKNS

Click here to download the sequence:
Link to NCBI Protein BLAST