Transcript Information: R_Transcript_197256.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87869833917683
Replicate 20.6432127042192
Replicate 30.70173813204843
Condition 2: 8 Hour
Replicate 10.85727317101953
Replicate 21.0275241108641
Replicate 31.0724146318391
Condition 3: 24 Hour
Replicate 11.2558975507497
Replicate 20.38608768298604
Replicate 30.86209777760208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197256.p1 GENE.R_Transcript_197256~~R_Transcript_197256.p1 ORF type:complete len:457 (+),score=57.63,PIF1|PF05970.10|7.1e-97,AAA_30|PF13604.2|6e-07 R_Transcript_197256:901-2271(+)
ATGGATTGCGTGAAGCATAATAAACCTGGTGCTTTCTTCATCGATGGTCCTGGCGGAACAGGAAAGACTTTCTTATATTGTGCATTATATGCTAAAGTCCGTTTGATGGGTAGGATTGTGCTCCCAACAGCAAGTTCAGGAATAGCTGCATCAAATATTCCAAGTGGACGCACTGCACACTCACGATTCAAGATCCCTCGGGACAACAGTGATTCTATGGTCTGTAGTGTTCCCAAGCAAAGTGATCTTGCAAAACTTTTAAGAGAAGCAACACTTATTATTTGGGATGAAGCATCAATGGCTAGAAAAGAGAATGTCGAGGCTGTGGACCGCCTACTCCGTGATGTGTGCAGCTCTTACTTTCCCTTTGGTGGGAAAGTTATTGTTTTTGGTGGTGATTTCAGACAGGTGTTGCCTGTCATTCCAAAACGAACACAACATGAATTGGTTGAGCACAGTCTTGTAAGTTCATATTTGTGGCCAAGTTTTAAGAGATTCACTCTTGCAGAAAACATGCGGGCCAGAGAAGATTCAGCTTTCACTGAACTATTGCTTAGGCTTGGAAATGGTGAATTACAACAATTCGAACGGTCAGATGTGACATTACCACATTCATTGTTTTCAGTTTTGCCAGCAACTGAAAATTGTCTTCCGAGTCTTGTAAATTCAGTATTCCAAGATATTGCATATCTTGCAGCTCATCCTCATGCATTTACTTCATGGGAAACACTAAGTCCAACAAATGATGAAGTTGATTGTATTAATCAATTAGTGATCGAAAAGTTCCCAGGGAAAGCAAACACTTACAAAAGTTTTGATACTACTATTGATGATGATTGCACTGCTCACCCTATTGAATTCTTAAATACTTTGTGCCCAGGAGGAATGAGTCCACATTGTCTGAGCTTAAAGGTTAACTGTCCTGTGATACTGCTTTGCAATTTAAACCCGTCTGTTAGGCTTTGTAATGGAACTAGGCTTATCTGTCGGGACTTTAAGACAAACCTTGTCATTTGTGAGATAGCAACCGGATATCGTGCTGGTGAGCTCGTTTTTATTCCACGAATTTCTCTCAGACCATCTACTTCTGTGACGTATCCATTCAAATTTGAGAGACGACAGTTTCCAATTAAACTTTGCTTTGCAATGACAATAAATAAATCCCAAGGGCAAACATTGACAGATGTTGCTTTGTATCTGCGCAAGCAATGCTTCTCACATGGACAGCTCTATGTTGCCCTATCAAGAGCTAAAAAAGCAAGCAGTGTAAAATTATTTGTACAGTCGAATGACAAAGTGGAACGACAATCAACAACACTGACGAATATTGTCTCATTTGATCTGCTTAAAAGAGCTGGCATACTGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197256.p1 GENE.R_Transcript_197256~~R_Transcript_197256.p1 ORF type:complete len:457 (+),score=57.63,PIF1|PF05970.10|7.1e-97,AAA_30|PF13604.2|6e-07 R_Transcript_197256:901-2271(+)
MDCVKHNKPGAFFIDGPGGTGKTFLYCALYAKVRLMGRIVLPTASSGIAASNIPSGRTAHSRFKIPRDNSDSMVCSVPKQSDLAKLLREATLIIWDEASMARKENVEAVDRLLRDVCSSYFPFGGKVIVFGGDFRQVLPVIPKRTQHELVEHSLVSSYLWPSFKRFTLAENMRAREDSAFTELLLRLGNGELQQFERSDVTLPHSLFSVLPATENCLPSLVNSVFQDIAYLAAHPHAFTSWETLSPTNDEVDCINQLVIEKFPGKANTYKSFDTTIDDDCTAHPIEFLNTLCPGGMSPHCLSLKVNCPVILLCNLNPSVRLCNGTRLICRDFKTNLVICEIATGYRAGELVFIPRISLRPSTSVTYPFKFERRQFPIKLCFAMTINKSQGQTLTDVALYLRKQCFSHGQLYVALSRAKKASSVKLFVQSNDKVERQSTTLTNIVSFDLLKRAGILS*

Click here to download the sequence:
Link to NCBI Protein BLAST