Transcript Information: R_Transcript_197617.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value3.4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4224301790098
Replicate 21.8371762864261
Replicate 32.0043395396633
Condition 2: 8 Hour
Replicate 12.142513182884
Replicate 21.6770661380889
Replicate 34.0841123895871
Condition 3: 24 Hour
Replicate 14.5915614455408
Replicate 23.3082888335866
Replicate 34.1039446287932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197617.p1 GENE.R_Transcript_197617~~R_Transcript_197617.p1 ORF type:internal len:80 (-),score=14.76 R_Transcript_197617:3-239(-)
GATGTACGGCTCATAATGGATAGGAATTCAAGACGATCCAAGGGAGTCGGGTATATTGAGTTTTACGATGTAATGTCAGTTCCAATGGCTATAGCACTCTCAGGGCAACCTATTCGTGGTCAGCCAGTCATGGTTAAACCCTCTGAAGCAGAGAAAAACCTGGTCCAGTCCACATCTACCACAGCTGCAGGAGCTGGTGGTCTCACAGGTTCAGGGGCAGCAAGGAGACTCTATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197617.p1 GENE.R_Transcript_197617~~R_Transcript_197617.p1 ORF type:internal len:80 (-),score=14.76 R_Transcript_197617:3-239(-)
DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPIRGQPVMVKPSEAEKNLVQSTSTTAAGAGGLTGSGAARRLYV

Click here to download the sequence:
Link to NCBI Protein BLAST