Transcript Information: R_Transcript_197627.p1


Annotated TAIR IDAT5G59710.1
Annotated Gene NameVIRE2 interacting protein 2
Annotated Gene Symbol(s)VIP2, AtVIP2
Annotation TypeOrtholog
Chromosome Positionchr5:24058157-24061736 | Forward length=614
E-Value5.1E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0303435701981
Replicate 21.6532520012833
Replicate 34.5993843204873
Condition 2: 8 Hour
Replicate 13.4704375515781
Replicate 23.4333637472687
Replicate 35.3597275453899
Condition 3: 24 Hour
Replicate 14.7000235269315
Replicate 23.039110477048
Replicate 34.3086032848223


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197627.p1 GENE.R_Transcript_197627~~R_Transcript_197627.p1 ORF type:internal len:254 (-),score=49.82 R_Transcript_197627:1-759(-)
CGTTTTACATCAAATAATATTCCCGTTGCTCTGTCTCAGATATCTCATGGAAGCTCACATGGTGGATATTCAGGAGTTACAAATAGAGGAGGTATGAATGTTGTAGGAAGCCCTGGGTATAATAGTAACACAAATGGTGTTGGTGGTTCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAATCGTAATGCTGTTCCAGGCCTAGGTGTCTCCCCTGTTTTGGGAAATGCAGGTCCTCGAGTTTCAGGTTCGATGGGAAGTATGGTTGGCAGTGGAAGCATTGGGAGGAATATAAGCTCTGGTGGAGGTCTCTCTGTGCCTGGTCTTGCTTCTCGTCTGAATATGTCCACAAACAGCGGATCTGGGAGCTTAGGAGTGCAGGGACCTAACAGATTAACAAGTGGCGTACTTCAACAAGCTTCACCGCAGGTACTTAACATGTTTGGAAACTCTTACCCTTCTGCTGGGGGGCCACTCTCGCAGAGCCATGTCCAAGCAGTAAATAATTTAAGTTCCATGGGGATGTTAAGTGATGATAACTCCAATGACAGTTCCCCTTTTACGCTAAATGACTTTCCTCAGCTCGGCAGTCGACCTAACTCTGCTGGGGGTCCTCAAGGACAATTAGGTTCATTGAGAAAAGGCCTTGGAGTCAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATCCAAATGAGGATTTTCCTGCCTTGCCAGGTTTCAAAGGTGGAACTGCTGATTATGGAATGGACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197627.p1 GENE.R_Transcript_197627~~R_Transcript_197627.p1 ORF type:internal len:254 (-),score=49.82 R_Transcript_197627:1-759(-)
RFTSNNIPVALSQISHGSSHGGYSGVTNRGGMNVVGSPGYNSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPVLGNAGPRVSGSMGSMVGSGSIGRNISSGGGLSVPGLASRLNMSTNSGSGSLGVQGPNRLTSGVLQQASPQVLNMFGNSYPSAGGPLSQSHVQAVNNLSSMGMLSDDNSNDSSPFTLNDFPQLGSRPNSAGGPQGQLGSLRKGLGVSPIVQQNQEFSIQMRIFLPCQVSKVELLIMEWT

Click here to download the sequence:
Link to NCBI Protein BLAST