Transcript Information: R_Transcript_197712.p1


Annotated TAIR IDAT5G64320.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25723247-25725439 | Reverse length=730
E-Value4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12250309365583
Replicate 20.14091476789462
Replicate 30.46120948180173
Condition 2: 8 Hour
Replicate 10.32866932815094
Replicate 20.45021909747354
Replicate 30.12182289006971
Condition 3: 24 Hour
Replicate 10.46223772941686
Replicate 20
Replicate 30.29379469378386


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197712.p1 GENE.R_Transcript_197712~~R_Transcript_197712.p1 ORF type:complete len:149 (-),score=24.48,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.2e-13,PPR_1|PF12854.3|1.2e-10,PPR_2|PF13041.2|0.58,PPR_2|PF13041.2|6.5e-22,PPR|PF01535.16|0.4,PPR|PF01535.16|6.9e-10,PPR|PF01535.16|1.9e-06,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|0.14 R_Transcript_197712:466-912(-)
ATGATCAGGAAGGGAATTCCTGCACATAGTTATACTGGTAATAGTTTGATCATGGGTTTTTGCAATGTTGGTTGCTTAGCATCTGCAGAGTGGGTTCTGTCTTTTTTGATCAACTACAAAGGTGGAACGGTTGATATCTTTCCTGATATTGTAAGCTTTAACACTTTGATTCATGGTTATTGCAAGGCTGGTCTGATGAATAATGCTCTTCAAGTAATGGAAGATATGAGGAAGATGGGTGTATCACCTGACATTATTACGTATAATATTCTAATTGATGGTTTCTGCAGAACTGGAGATTTTATCGAGGCCAAGAATCTTATGACTAAGCTACTGGGTTCGCATTTTGATAAAGATTCTTTTTCAGACCTAGAATTTAACCAGGGTGATGCAAAAGAAGCAAGTAGACCAATAGGTTCAGAAGGTGGGATTAATGTTGGCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197712.p1 GENE.R_Transcript_197712~~R_Transcript_197712.p1 ORF type:complete len:149 (-),score=24.48,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.2e-13,PPR_1|PF12854.3|1.2e-10,PPR_2|PF13041.2|0.58,PPR_2|PF13041.2|6.5e-22,PPR|PF01535.16|0.4,PPR|PF01535.16|6.9e-10,PPR|PF01535.16|1.9e-06,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|0.14 R_Transcript_197712:466-912(-)
MIRKGIPAHSYTGNSLIMGFCNVGCLASAEWVLSFLINYKGGTVDIFPDIVSFNTLIHGYCKAGLMNNALQVMEDMRKMGVSPDIITYNILIDGFCRTGDFIEAKNLMTKLLGSHFDKDSFSDLEFNQGDAKEASRPIGSEGGINVGF*

Click here to download the sequence:
Link to NCBI Protein BLAST