Transcript Information: R_Transcript_197945.p1


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeOrtholog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value2.4E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4671203905668
Replicate 25.0445656844353
Replicate 33.123646035839
Condition 2: 8 Hour
Replicate 12.2259877224768
Replicate 22.0328074401078
Replicate 31.7680140214663
Condition 3: 24 Hour
Replicate 11.1926133624781
Replicate 21.1457277345754
Replicate 33.2689429077834


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197945.p1 GENE.R_Transcript_197945~~R_Transcript_197945.p1 ORF type:complete len:154 (+),score=12.29 R_Transcript_197945:90-551(+)
ATGGGGAGCCAAGGCATAAACATCCCTAGTTTCAACCAGGTGAGCTTTGATAACTTCGTCCGGTCGAACCCCAAGTCAGACCAGTTCAAGGTGAACCGGTTCCACCATGTGGAGTTTTGGTGTAATGACGCTACCACCATTAGCCGTCGCTTCTCCTACGCACTTGGCATGCCTTTGGTTGACAAATCCGACCTCTCTACCAACAACCTTGTCAACGCCTCTTATCTCCTCCAAAGGGGCGACCTCAACCTCCTCTTCACCGCCCCGTACTCTGCCACTATTTCCTCCTCCTCCCCTTCTGCCACCACCACGGCTTCCATCCCGACATTCGACCCTGCCGTCTGCTCCTCCTTTGTCACCAACCACGGCCTTGGCGTTCGTGCTATCGCCCTCGAGGTAGAGGATGCCGAGATTGCCTTTGAGGCCAGTGTGGCTGCCGGTGCCCGTCCTTCTTTTCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197945.p1 GENE.R_Transcript_197945~~R_Transcript_197945.p1 ORF type:complete len:154 (+),score=12.29 R_Transcript_197945:90-551(+)
MGSQGINIPSFNQVSFDNFVRSNPKSDQFKVNRFHHVEFWCNDATTISRRFSYALGMPLVDKSDLSTNNLVNASYLLQRGDLNLLFTAPYSATISSSSPSATTTASIPTFDPAVCSSFVTNHGLGVRAIALEVEDAEIAFEASVAAGARPSFP*

Click here to download the sequence:
Link to NCBI Protein BLAST