Transcript Information: R_Transcript_19798.p1


Annotated TAIR IDAT1G29270.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10230140-10231021 | Forward length=155
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95067504972493
Replicate 21.0935573133489
Replicate 31.0737533248197
Condition 2: 8 Hour
Replicate 10.76518327960141
Replicate 20.4658517050247
Replicate 31.4180945797177
Condition 3: 24 Hour
Replicate 10.83700338851005
Replicate 20.22974228011018
Replicate 30.91198769528739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19798.p1 GENE.R_Transcript_19798~~R_Transcript_19798.p1 ORF type:5prime_partial len:192 (+),score=19.17 R_Transcript_19798:1-576(+)
CTCCACTCACCACTTCTTCTCGCCTATCGCTGGCAACCACTCACCAGTCACCACTCAGACAGTCAGGCACTCGCCGGCATCGTCTCTCCCTCACGAGTCACGGCCTCCACTCACTACTCAGACAGTCAGACGCGTGACAGACGTTCAAAGACTGTGAAAACTAGCTCAATCATCAAGGATGCATTCCTCTACATATCAGCCTTAAAACTAAAGCTAGAGGCACTCAAGAGGGAAAATATGAGTCTCGTGACCAATCACTTTAATCAACCCCCTGTATTGGAAGTGAACGTGGAAAAGCTTGATACAAAGGTGTTTCTATTGAGAATAAGGAGCCAGAAAAGAGGAGATAATCTCGTTTGTGTTCTACAAACATTGGAAGAGATGGGGATTGAAGTTATACAAGCCAAGGTTTCATGCAATAGTCACTTTAATATGGAAGCCATAGTTGAAGTTACTAATAGTACTATTGATGTTAGTAGTGACAATATTAATGATCTTGATGTCCAACAAGCTTTGGATCCAAGTGTTTTGACTCAAGTTATCTTGAAATCCATGGAGAGAAGTGATTATTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19798.p1 GENE.R_Transcript_19798~~R_Transcript_19798.p1 ORF type:5prime_partial len:192 (+),score=19.17 R_Transcript_19798:1-576(+)
LHSPLLLAYRWQPLTSHHSDSQALAGIVSPSRVTASTHYSDSQTRDRRSKTVKTSSIIKDAFLYISALKLKLEALKRENMSLVTNHFNQPPVLEVNVEKLDTKVFLLRIRSQKRGDNLVCVLQTLEEMGIEVIQAKVSCNSHFNMEAIVEVTNSTIDVSSDNINDLDVQQALDPSVLTQVILKSMERSDYC*

Click here to download the sequence:
Link to NCBI Protein BLAST