Transcript Information: R_Transcript_197995.p1


Annotated TAIR IDAT4G21065.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11245976-11247763 | Forward length=595
E-Value5E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10430263402696
Replicate 20.29994714880426
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25555293532784
Replicate 30.051861744629677
Condition 3: 24 Hour
Replicate 10.13118746987259
Replicate 20.31507512700825
Replicate 30.31268149552711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_197995.p1 GENE.R_Transcript_197995~~R_Transcript_197995.p1 ORF type:5prime_partial len:350 (+),score=61.18,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|4.9e-09,PPR|PF01535.16|0.029,PPR|PF01535.16|0.073,PPR|PF01535.16|48,PPR|PF01535.16|1.6e+03,PPR_2|PF13041.2|4e+02,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|0.00028,PPR_2|PF13041.2|4.6e-08,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|8.2,PPR_2|PF13041.2|91,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|49,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|2.2e+02,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.006,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|2.4e+03 R_Transcript_197995:2-1051(+)
GGCGGGGCACTTAGGATCTTTGACGAGATGCCTGGGAAGAGTGTTGTCTCTTGGACTACAATGCTTACGGGTTATGCTCGAAATGGATGGTTTCGACAGGGGTTGATGTTGTTTCGAGAGATGAGGAGTGCTGGTGTGAAACTGGATCAGGTGGCACTTGTGGCAGCTTTGTCAGCTTGTGCTGAGTTAGGTGACCTGTGCTTAGGTAAATGGATTCATTCATATGTTAACAAGAGATTTCAGGGGAGGAATGAAGAAATCGATTTGCGTTTACAAAATGCCCTTATTCATATGTATGCTAGCTGTGGATTAATTGAAGAAGCATATAGGGTCTTTAGTGAAATGCCAAGCAGAACCATAGTTTCTTGGACAAGCATGATCATAGGATATGCTAAGCACGGGCTTGCAGAAAAGGCGTTGGATGTTTTTAAAATGATGGAAAACTTGGGTGATATGAGGCCGGATTCTGTAACTTTCATAGGAGTCCTTTCTGCCTGCAGCCATGCAGGATACGTTGCAGAAGGGCGTTGGTACTTCAAACAAATGAAAGAGAAATGGGGTATTGAACCGAGTATTGAACATTATGGTTGCATTGTTGATCTATTGAGTCGGGCTGGCTTGTTGGATGAAGCACAAGGGGTCATTGAAAGTATGCCGATGAAGCCAAATCATGTTGTGTGGGGTGCACTTCTTAGTGGATGTTTGATTCATAGGAATCCAGAGCTAGCATCCTATGCAGCTCAGAATCTCATGATGGAGCTTGACCAGGACCAAATAATAGATTATCTTGTGCCTGTTGCAAATGCCTATGCAATGGCCAAACGATGGCAAGAGGTAACCATAATACGGCAGAAGATCTTCAAACTCGGTTTACAGAGCTCCTCAGGCCAGAGTTGGCTCCAGATAAATGGATCAATACAAGATTTTGTGTCTGGTGATACTACCCATGAACATGGTTCACCTATTTACGAGATGCTCCATAGACTCGATAAAGAATTGAGGAATGAACCGAAAACACAGAACATGAAAGAGGAATTTGTTGATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_197995.p1 GENE.R_Transcript_197995~~R_Transcript_197995.p1 ORF type:5prime_partial len:350 (+),score=61.18,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|4.9e-09,PPR|PF01535.16|0.029,PPR|PF01535.16|0.073,PPR|PF01535.16|48,PPR|PF01535.16|1.6e+03,PPR_2|PF13041.2|4e+02,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|0.00028,PPR_2|PF13041.2|4.6e-08,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|8.2,PPR_2|PF13041.2|91,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|49,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|2.2e+02,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.006,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|2.4e+03 R_Transcript_197995:2-1051(+)
GGALRIFDEMPGKSVVSWTTMLTGYARNGWFRQGLMLFREMRSAGVKLDQVALVAALSACAELGDLCLGKWIHSYVNKRFQGRNEEIDLRLQNALIHMYASCGLIEEAYRVFSEMPSRTIVSWTSMIIGYAKHGLAEKALDVFKMMENLGDMRPDSVTFIGVLSACSHAGYVAEGRWYFKQMKEKWGIEPSIEHYGCIVDLLSRAGLLDEAQGVIESMPMKPNHVVWGALLSGCLIHRNPELASYAAQNLMMELDQDQIIDYLVPVANAYAMAKRWQEVTIIRQKIFKLGLQSSSGQSWLQINGSIQDFVSGDTTHEHGSPIYEMLHRLDKELRNEPKTQNMKEEFVDW*

Click here to download the sequence:
Link to NCBI Protein BLAST