Transcript Information: R_Transcript_198035.p1


Annotated TAIR IDAT3G48190.1
Annotated Gene Nameataxia-telangiectasia mutated
Annotated Gene Symbol(s)ATM, ATATM
Annotation TypeHomolog
Chromosome Positionchr3:17797628-17828361 | Forward length=3845
E-Value4E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27063698285415
Replicate 20.31131252676554
Replicate 30.52832673203646
Condition 2: 8 Hour
Replicate 10.12101745443449
Replicate 20.47889862262836
Replicate 30.35884567948047
Condition 3: 24 Hour
Replicate 10.49168285660651
Replicate 20.25434400697536
Replicate 30.32452939403966


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198035.p1 GENE.R_Transcript_198035~~R_Transcript_198035.p1 ORF type:3prime_partial len:607 (+),score=80.73,TAN|PF11640.4|4.5e-05,TAN|PF11640.4|2.4e+03 R_Transcript_198035:101-1819(+)
ATGGCTACAGTAGTCACTTCAAGAGACATTCAGGAAATCGTCTCAAAGCTATCTTCCGACAAAGCGAAAACTCGAGAAGAGGGAATGAAACTGCTGAATACATGGCTAGAAGGTGAAAGGTCGATTACTTTTTGTAAATATTTGAGCCGTAAGACTGCAATGCTTAAAACTGATGAAATACCTGGCTCTGAAACTTGGCCGTTTCTTATTACTTTGCTGATCGATTGTACTTGTAAGGAGATATCAGCGAGTAAGAAACGTGCACCGAAATTGCTGTATGCTAAAACCCTAAGGATTGTGGTGCAGCGAGCTGAGGATGGCCAGGGCAATAATCTGCCACTCATAATGGTGGCCAAATTACTTTTTAATCACGTTTGGGATGTCCTGAAAGATGTTCATAGCTTTCACTCAGAATATGGTATAATCCTGCGGCATGTAATGGCTGTCAGAGATTATCGTTTTCACATGAGGAAGCGGGTCTATTGTGGGCTTGTACTTTTGTTTATGGGAAAGATCGAAGCAAGTTTAAGTGAGAAGCATTACAGTCATTTCAATCTCAAAGAAGAAGTCTTCCGATATATCCTGACACTACATTCTCTGCTGGAAAATCCTCCCAGGGATTTTCCTGAAACTCTTAGAGAAGATGTTGTGAAAGGTTTCACTGGGATCTTTGCATCTATGAGGGAGGAGGGAAAGATTTCACGCAAACTTTTCGAGTGTCTCAACACGTACTTGATGGAAGATGGCCCAAACCTAGGCTCTCAATCCTTAGAAATTCATAGCTCTGTGCAGCATTTTGTGTTCCACTATTGGCTTACAACGCATGATCGGGGTCTCAAGGATGCCTTTATTTTGTATGCGAAGTTACAACTCCAGTTGAGTAGAGGCAATGAAGATGGTGGCCCTTTGATGGAACAAATTTTAGATGTAGTCAGTAGGGAGCTTGATCAATGCAGTACTCCCGGCATTAGTACTTCACGGGCTGAAAATATCAAAGATGAAAAATTTGGAACAACTTCACATCGCGATTTACTGGAGCTTGCAGCCCTTGTATTTTATCGGGCTTGTGTCAGTGTCCATAAACTACCATTAGCTGAAAAACGAGCAAGGAGGGAAAGTGCTGCGACCTACTTGAAGGAGGGGTTAATGGCAGGAAAATGGTTATGGCATGCTGCGTTTTGTTACCTTTGTCATAGCTATCAACAGCGCCTGGCTGTGGATCTTTTTACCTACTGGTTTGACGGCATATGCTCCAGTTTGCAAAGGATATTGTCTGATGCGAATATGGAGCATTCTTATGATGGCTTACTTTGGACGCTGCGGAGCCTACAACAACTCTTTCTGCTGCTGACACCCCTAGCAGCATCGGGGAAGATCTTGCAGAAGCCATCTTCTATGTCAAACAAGATCGGCCGGGGTTGGCAAAAAGTGTGGAGCTGCCTTGTTCATGGTTTGCCTATGTTCAGCAATGTCTCTTCTGTTGCAGATGCTGCTTTCAGACTTTTTGGAGACATGGTCTCACATGACATACTTAATATGACAGTACTACCTCTGGATGTTTGGGACCTTCAGTGTTTTAAGCGTCTGTCATCTCCGTCTGCTCTGTACTTCATTTCTTGTTACTTCTCTAGAAAAGGCTCTCAAAGCTTGTTGTCTCTAGGAGATCTATTGAGCAAAGTCTTTGGGTTGAACTTACTTGATTGGCATGGACGTGTAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198035.p1 GENE.R_Transcript_198035~~R_Transcript_198035.p1 ORF type:3prime_partial len:607 (+),score=80.73,TAN|PF11640.4|4.5e-05,TAN|PF11640.4|2.4e+03 R_Transcript_198035:101-1819(+)
MATVVTSRDIQEIVSKLSSDKAKTREEGMKLLNTWLEGERSITFCKYLSRKTAMLKTDEIPGSETWPFLITLLIDCTCKEISASKKRAPKLLYAKTLRIVVQRAEDGQGNNLPLIMVAKLLFNHVWDVLKDVHSFHSEYGIILRHVMAVRDYRFHMRKRVYCGLVLLFMGKIEASLSEKHYSHFNLKEEVFRYILTLHSLLENPPRDFPETLREDVVKGFTGIFASMREEGKISRKLFECLNTYLMEDGPNLGSQSLEIHSSVQHFVFHYWLTTHDRGLKDAFILYAKLQLQLSRGNEDGGPLMEQILDVVSRELDQCSTPGISTSRAENIKDEKFGTTSHRDLLELAALVFYRACVSVHKLPLAEKRARRESAATYLKEGLMAGKWLWHAAFCYLCHSYQQRLAVDLFTYWFDGICSSLQRILSDANMEHSYDGLLWTLRSLQQLFLLLTPLAASGKILQKPSSMSNKIGRGWQKVWSCLVHGLPMFSNVSSVADAAFRLFGDMVSHDILNMTVLPLDVWDLQCFKRLSSPSALYFISCYFSRKGSQSLLSLGDLLSKVFGLNLLDWHGRVK

Click here to download the sequence:
Link to NCBI Protein BLAST