Transcript Information: R_Transcript_198099.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8761421258265
Replicate 20.50391120999115
Replicate 30.82464255346149
Condition 2: 8 Hour
Replicate 10.4897172989449
Replicate 20.53666116418845
Replicate 30.50824509737084
Condition 3: 24 Hour
Replicate 10.27549368673245
Replicate 20.35288414224924
Replicate 31.0506098249711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198099.p1 GENE.R_Transcript_198099~~R_Transcript_198099.p1 ORF type:complete len:250 (+),score=59.53 R_Transcript_198099:855-1604(+)
ATGAGGGGAAAACTGAAGGTGCCTTCCAAACAAAGCACAAAGAAAAGCGAAGAAATTTCAAAAGCAACAAAAAGAAGCAATATGCCAAGGGTTATGTTAAAGGCCAATTCAATTGGAAATGAGAAGAAAGGAGCATTTCCACCTTGTGGCATTTGTAAGAAAACAAATCATCTAGAGTGGAACAAGGGAAAATCTCCTTGTGGTATTTGCAAGAAGTTTGGCCATGATGAGAAAGATTGTTGGCATAAAGACCAAAAGGCAAAGGCTAACATGATGGAGAGCAAGGACCCCGTGGAACGCATCTTTTATACTTCTCAAGCTTCACTAGCAAGCACAAAAGATGTGTGCCTTATTGATAGTGATTGCACAACCCACATGACCAATAATGAAAGTATCATTACTGAAATTGATAAATCAGTGAACATTCCTCTCAAAATGGTTGATGATTCTATCATTAAGTCTCAAGGAAAAGGTATTATTGCTATTAAGCCAAACACTGGAACGCAACACATCAAGAATGTTTTGCTAGTTCCTGATTTTGATCAAAAATTGCTGAGTGTCCCTCAAATGATGCAAAGTGGTTACTCATTGTCTTTTGAAAGCAATTCATGCAATATTTATGATCAGCATGGAAAGGAAATTGCCCGAGCTCTTGTTGGGAGTTGTCTCCAGGAAGATGCTAGATGGGTGAACATGATGATTCTTGGCTTTGGCATGAAAAGCTCTGACATTACAACTTTCATGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198099.p1 GENE.R_Transcript_198099~~R_Transcript_198099.p1 ORF type:complete len:250 (+),score=59.53 R_Transcript_198099:855-1604(+)
MRGKLKVPSKQSTKKSEEISKATKRSNMPRVMLKANSIGNEKKGAFPPCGICKKTNHLEWNKGKSPCGICKKFGHDEKDCWHKDQKAKANMMESKDPVERIFYTSQASLASTKDVCLIDSDCTTHMTNNESIITEIDKSVNIPLKMVDDSIIKSQGKGIIAIKPNTGTQHIKNVLLVPDFDQKLLSVPQMMQSGYSLSFESNSCNIYDQHGKEIARALVGSCLQEDARWVNMMILGFGMKSSDITTFMH*

Click here to download the sequence:
Link to NCBI Protein BLAST