Transcript Information: R_Transcript_198280.p1


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25176497868578
Replicate 20.036200517959135
Replicate 30.35544937649202
Condition 2: 8 Hour
Replicate 10.21108504264867
Replicate 20.1156597336613
Replicate 30.12518352151991
Condition 3: 24 Hour
Replicate 10.11874727876399
Replicate 20.11407892529609
Replicate 30.22642453124376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198280.p1 GENE.R_Transcript_198280~~R_Transcript_198280.p1 ORF type:complete len:580 (+),score=116.65,DUF4283|PF14111.2|5.6e-21,zf-CCHC_4|PF14392.2|1.6e+04,zf-CCHC_4|PF14392.2|2.9e-09 R_Transcript_198280:73-1812(+)
ATGGATAACTCTTTGGAGAATATTCTACCCTCTGGGGTCCCTAGGAGGAGAGGACCGGTTTTTTACCCACCAGAAGATATCTTGGACCATGAAGATGAATATTGGGAGTGTACTGTGGTGGGTACTTTTGTGGATTCACGTAGGTTTTCGGAGGCGCAGGTGCAGCAAGTTGTTTCTAACCACTGGCATTCTGTTGTATCGATTATCGTCAAGAGACAGGGACGTCTGTTCTTCTTTATTTGTGGGTGTGATGCTGATAGAGACTTCCTTTTACAACAACAACCGCTTAATATTAATGGTGCTCTTTTGGCTCTGTCCAAATGGACTAAGCCTTTTATTCCAAGAAATCTAGTGGTTAGAGAGCTTGATCTTTGGGTTAAGATTGATGGCGTCCCTGTTGCCATGATGAAAGAGGAAGTAGCTGAAGCTTTGGCTACCAGGATTGGGCAAGTCTTACAGGTAGAGATGATTAATCCTTTAATTCCTGATAACTCTTTCATGAGGGTCAAGGTGAGGGTGAATATAAGGGAGCCCCTCATTCCGGGCTGCTATTTTCAATACACAAATGATCGTATTACGTGGGTTTTATTTCGTTATGAGAAGGTGTTTCAATTCTGTAAAAAGTGTGGGAGGATAGGCCATACAATTTCTCATTGTTATCTATCAGTAGTGAGTGCCGATTTCTTGCTTGAAAAGAGGCTTGCTCCTCTCACTATGAATGGGTTGGAAGTTGTCTATACTAATGGTGATATTCCTCAGTTTACTAATGCACTTAGGGGCCTACCTAGGACCATGGAGTTTTTAACTACTACTTTGTGGTTCAATGGGCCCGGTCCTGTTATGAATGAGGATGAGTTCATGGAGGTGGATGATGAGGATGGGGACAACGATGATGATGACGAACCCAGAGATGAGCCTCCCAATTCCGAGCCTGTTGCCCCTACAATGGAGGCTGAGGGGCTTAATCCTCCTGTCAATGATCAGCAGAATTTTCAAGCTCCAGAAAATGGTAATAGTCATGTTCATCAGAATGGTCATCATAATGTCCTGAGGGATCTACCTCAACTTCATGCGGATACCATGCTTGGACTGGGTGTCTTTCAGGAGGGTCTTCAGAGTTCACTTCTGGATGGGTCTTTTGGTACGCTTGCTGCGGGGGAGTCTTCGTCTCCCAATACCACTCTGGTGGCGAGACTTGATTCGGAGACTTCTGAAGATTCTTGTGATTTCCTTCTGCCTATTTCTCATGGTCAAGCGGAAGTCCAAGTCTTGACTGGTGTCTTCTCTGAGAGTTTGAATCCAGTTGCATACGCTTCCCAGGGTCTAGATTCTTCGGAAGCTGCAGTTAATGTGATTGATGCTACAGGTGATTTTTCTCCTAATTCACAAGTTATCTCAAGTTTTGACTTGAATATTGACTCTAATGCATCTGGTATTAGTCTTGTTTCGGGTGGGAATATTGTTTTTAATACTTTGGATGGTGTTTTCCATATTCCTACTTCTTGGCTGGAGGCCCCACTTTGGACTGGACCAAACTTATTATCCGAGGGGTCCAGTTTGAGTCCCTCATTTAGTTCTTGGGCCTCTCAACAGTCTTTGGATTCTGTATGGGCTTCTGAAAATGTGGATGAAGAATTTTGGGTCAGTTTGTTGTCTGCTTTTCTGTCCAACCGGTTATCTGTATCTCCAGACCCAACATCAGATCCTTTTGCCCCAAGGTCTATACCCCCAATACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198280.p1 GENE.R_Transcript_198280~~R_Transcript_198280.p1 ORF type:complete len:580 (+),score=116.65,DUF4283|PF14111.2|5.6e-21,zf-CCHC_4|PF14392.2|1.6e+04,zf-CCHC_4|PF14392.2|2.9e-09 R_Transcript_198280:73-1812(+)
MDNSLENILPSGVPRRRGPVFYPPEDILDHEDEYWECTVVGTFVDSRRFSEAQVQQVVSNHWHSVVSIIVKRQGRLFFFICGCDADRDFLLQQQPLNINGALLALSKWTKPFIPRNLVVRELDLWVKIDGVPVAMMKEEVAEALATRIGQVLQVEMINPLIPDNSFMRVKVRVNIREPLIPGCYFQYTNDRITWVLFRYEKVFQFCKKCGRIGHTISHCYLSVVSADFLLEKRLAPLTMNGLEVVYTNGDIPQFTNALRGLPRTMEFLTTTLWFNGPGPVMNEDEFMEVDDEDGDNDDDDEPRDEPPNSEPVAPTMEAEGLNPPVNDQQNFQAPENGNSHVHQNGHHNVLRDLPQLHADTMLGLGVFQEGLQSSLLDGSFGTLAAGESSSPNTTLVARLDSETSEDSCDFLLPISHGQAEVQVLTGVFSESLNPVAYASQGLDSSEAAVNVIDATGDFSPNSQVISSFDLNIDSNASGISLVSGGNIVFNTLDGVFHIPTSWLEAPLWTGPNLLSEGSSLSPSFSSWASQQSLDSVWASENVDEEFWVSLLSAFLSNRLSVSPDPTSDPFAPRSIPPIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST