Transcript Information: R_Transcript_198288.p1


Annotated TAIR IDAT5G17410.2
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5730651-5736415 | Forward length=679
E-Value7.4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67603559091551
Replicate 21.5552815123184
Replicate 31.2725965331196
Condition 2: 8 Hour
Replicate 11.3603258304025
Replicate 21.4493164156324
Replicate 32.6891274993166
Condition 3: 24 Hour
Replicate 10.42514457829082
Replicate 21.8379382408814
Replicate 30.81065572914435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198288.p1 GENE.R_Transcript_198288~~R_Transcript_198288.p1 ORF type:complete len:108 (+),score=2.04,Spc97_Spc98|PF04130.9|7.7e-11 R_Transcript_198288:3-326(+)
ATGAATAGCCTCCTACATTACTTAACGTTTGAGGTTCTTGAACCCAATTGGCATGTGATGAATAATAGGCTGCTGTCAGCCAAGAGCATAGATGAGGTTATCCAATATCATGACTTATTTCTGGAGAAGTGTCTGAGAGAATGTATGCTGCTTCTGCCCGAACTTCTGAAGGTCAAGTTGTACATTCTTTTTGAGCTTTTAAATATCAACGTCATATATACATCTATATATTTGGTGGATCAAAAAAAATGTATATATCTATCTATTTGGAAAAATAGCAACCAAGGGCATCTACTCAAACCAGTAAGCAACTACACAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198288.p1 GENE.R_Transcript_198288~~R_Transcript_198288.p1 ORF type:complete len:108 (+),score=2.04,Spc97_Spc98|PF04130.9|7.7e-11 R_Transcript_198288:3-326(+)
MNSLLHYLTFEVLEPNWHVMNNRLLSAKSIDEVIQYHDLFLEKCLRECMLLLPELLKVKLYILFELLNINVIYTSIYLVDQKKCIYLSIWKNSNQGHLLKPVSNYTS*

Click here to download the sequence:
Link to NCBI Protein BLAST