Transcript Information: R_Transcript_198293.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99561605207557
Replicate 21.7178791249698
Replicate 31.6659445524475
Condition 2: 8 Hour
Replicate 12.4485864947245
Replicate 21.6262459520862
Replicate 32.4752196300528
Condition 3: 24 Hour
Replicate 13.5480247533725
Replicate 22.2055258890577
Replicate 31.9897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198293.p1 GENE.R_Transcript_198293~~R_Transcript_198293.p1 ORF type:internal len:110 (+),score=16.87,zf-RVT|PF13966.2|5.5e-09,zf-RVT|PF13966.2|4.4e+03 R_Transcript_198293:2-328(+)
TGGACAGTTGCCTTGGACCGTGTTAATACCCATGATGTTCTGCAACGACGTTATGCACATTGGTGTCTTTCTCCTGGAGTGTGTGTTATGTGTCGAAGAGAGAACGAAACCAATTCCCATCTCTTTCTGACTTGTGAGGTGGCACAAGGCTTATGGCGTAGACTTTTTGGGTTGAGGGGTGAGAATTGGGTATGCCCACCATCTGTCTCTCATCTTTTGTTGGGTCATTATGCGGGTTTTGGGAGAGGAAAGGATCAGAGCTTGTTATGGCGTAGTGCTATGGTGACAATGCTTTGGAGCATTTGGTTGGAGAGGAATGCAAGGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198293.p1 GENE.R_Transcript_198293~~R_Transcript_198293.p1 ORF type:internal len:110 (+),score=16.87,zf-RVT|PF13966.2|5.5e-09,zf-RVT|PF13966.2|4.4e+03 R_Transcript_198293:2-328(+)
WTVALDRVNTHDVLQRRYAHWCLSPGVCVMCRRENETNSHLFLTCEVAQGLWRRLFGLRGENWVCPPSVSHLLLGHYAGFGRGKDQSLLWRSAMVTMLWSIWLERNARL

Click here to download the sequence:
Link to NCBI Protein BLAST