Transcript Information: R_Transcript_19839.p1


Annotated TAIR IDAT4G12740.1
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7494578-7497596 | Reverse length=630
E-Value9.2E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4695812471849
Replicate 26.8277443083074
Replicate 38.6546132647117
Condition 2: 8 Hour
Replicate 13.5440067686802
Replicate 23.9089511489291
Replicate 34.5720222239321
Condition 3: 24 Hour
Replicate 15.2216065311132
Replicate 25.5138147226443
Replicate 36.6239106289295


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19839.p1 GENE.R_Transcript_19839~~R_Transcript_19839.p1 ORF type:complete len:532 (+),score=112.23,HhH-GPD|PF00730.21|3.5e+02,HhH-GPD|PF00730.21|1.8e-17,NUDIX_4|PF14815.2|1.4e-13,HHH|PF00633.19|5.7e+03,HHH|PF00633.19|1.7e-05 R_Transcript_19839:572-2167(+)
ATGTTTGAATTGAAAGTTGCAACCTCCATATTCAGGCGGGAAGAACACAAAAACAAAAATCCTAAAAATTTCAAATCAATTCCCCCAAAATTTCTCTCTCCCCTGGCTGCTCTACTCTTCCTCCCTTCACCACTCCCACAATTCCCAAACTCAATGCCAAAAACCACAACCACCAAAAATGGAACTTTATCCACTAGACCCAAGAGAAAACGACCCCCAAGACCGAATATTTCCCCAAAAACTGCCACCAAATGCGAGACTGTAGATATAGAGGACTTATTGAAGTTCAATGAAGAAGAAATTGCTGAAATTAGGGCATCTCTGTTAGACTGGTATGATAAGAATAAAAGGGTCTTGCCTTGGAGAAGATTGGCTTCAAATTCTGATAAACAACAAGAAGAAGATGAAAATGAAGGAGAGAGAAGGGCTTATGGGGTTTGGGTTTCGGAAGTGATGCTTCAACAAACTAGGGTTTCTACTGTTATTGATTATTATAACAAGTGGATGACCAAATGGCCCTCTGTTCTTCATCTCTCTCAAGCTTCCCTTGAGGAGGTAAACCAAATGTGGGCAGGATTGGGATATTATAGAAGGGCCAGGTTTTTGTTTGAGGGGGCAAAAAAGATTGTTGAGGAAGGAGGCAGATTCCCTAGAACAGTTTCTGCTCTGAGGAAGATTCCTGGGATCGGGGATTACACTGCAGGTGCCATTGCCTCCATTGCATTCCAGGAGGCTGTGCCAGTGGTAGATGGAAATGTGGTTAGGGTGCTTGCCAGATTAAAGGCTATATCTGCTAATCCAAAGAACACTGTGACCGTCAAAAAGTTTTGGTCATTAGCTTGGCAACTAGTGGATCCTTGTAGACCTGGAGACTTCAACCAAGGACTAATGGAGCTTGGTGCGACTATTTGCACTCCGACTAGTCCAAGCTGTTCCAGTTGTCCTGTTATGACTCAATGTCGTGCATTATCACTTTCTCAGGAGGATGGCTTGACAAAAGTTACCGACTTTCCACTGAAAGTTGTAAAAGCAAGGCAGAGAAATGAATTTTCTGCTGTCTGTGTTGTGGAAATAACAGATTCCAAGGATCTAGAAAGTGATCAGGCCAATAGACACTACCTTCTTGTAAAGAGGCCAGATGAAGGCCTGCTAGCTGGACTTTGGGAGTTCCCATCTGTGCTAATGAAAAAGGAGACAGAAATGGCAAGTAGGAGGAAAGCAATCGATAGTTTCTTGAAGACGTCATTCAGTATTGATAGTAAGAAAACCTGTGAAGTGATCTCAAGAGTTGATGTTGGGGAGTATGTCCATATCTTCTCTCACATACGTCTAAAGATGTATATTGAATTGTTGAGTTTACATTTAAAAGGTGGGCTGAATTTCCAGCAAAGTGTGCCTGCTGAAGGACCTATGGTATGGAAATGTGTTGATAGCAAGGAACTTTCAAGGATGGGTCTGACATCTGGTGTCAAGAAGTTACATTGTCTTCCTCTTCCATCTCCTTCTCTTTTTGATTTGAAGGTTTACACAATGGTTCAAAAATTTAAACAGAGTAACTTGACCACTGCCAAGGAAGATACCAAACCAACAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19839.p1 GENE.R_Transcript_19839~~R_Transcript_19839.p1 ORF type:complete len:532 (+),score=112.23,HhH-GPD|PF00730.21|3.5e+02,HhH-GPD|PF00730.21|1.8e-17,NUDIX_4|PF14815.2|1.4e-13,HHH|PF00633.19|5.7e+03,HHH|PF00633.19|1.7e-05 R_Transcript_19839:572-2167(+)
MFELKVATSIFRREEHKNKNPKNFKSIPPKFLSPLAALLFLPSPLPQFPNSMPKTTTTKNGTLSTRPKRKRPPRPNISPKTATKCETVDIEDLLKFNEEEIAEIRASLLDWYDKNKRVLPWRRLASNSDKQQEEDENEGERRAYGVWVSEVMLQQTRVSTVIDYYNKWMTKWPSVLHLSQASLEEVNQMWAGLGYYRRARFLFEGAKKIVEEGGRFPRTVSALRKIPGIGDYTAGAIASIAFQEAVPVVDGNVVRVLARLKAISANPKNTVTVKKFWSLAWQLVDPCRPGDFNQGLMELGATICTPTSPSCSSCPVMTQCRALSLSQEDGLTKVTDFPLKVVKARQRNEFSAVCVVEITDSKDLESDQANRHYLLVKRPDEGLLAGLWEFPSVLMKKETEMASRRKAIDSFLKTSFSIDSKKTCEVISRVDVGEYVHIFSHIRLKMYIELLSLHLKGGLNFQQSVPAEGPMVWKCVDSKELSRMGLTSGVKKLHCLPLPSPSLFDLKVYTMVQKFKQSNLTTAKEDTKPTK*

Click here to download the sequence:
Link to NCBI Protein BLAST