Transcript Information: R_Transcript_198470.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.081486432833566
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.29947609608731
Replicate 30.08103397598387
Condition 3: 24 Hour
Replicate 10.10249021083797
Replicate 20.098460977190077
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198470.p1 GENE.R_Transcript_198470~~R_Transcript_198470.p1 ORF type:internal len:224 (+),score=39.27,gag_pre-integrs|PF13976.2|1.8e+03,gag_pre-integrs|PF13976.2|1.4e-09 R_Transcript_198470:2-670(+)
TTTACTAAAACTCAGTGTATATTACAGGGCCTTTCTCTGAGGAGGCCTCAGGCTCTTGGTAATGTGCATGGAGGCTTATATCTCTTTCACATGCCACCTGAATCTCAACAACTTACTGTTCCAGTTATATCTTCTGCCTGCTCACAGAATAAACCTGTTCATGCTTGTGATCATGTCAATATAGCTGATTCTGTACATGCTGTTACATCTGGTAATGCTTGTACTGAGAATAATGTTCATGATAATAATAAGATTGTTCCAGTTGTTGATAATACATTTGTGTGTACTGCTGATTCATATTTGCAATGTCATGCATCTATGAAGGACAATTTTCTCCTTTGGCATAAAAGACTTGGACACTTGCAATTCTATAAACTCAAAACACTGCCTTTCCTCCATGGTTCTATGGATTCTTCTCCATTCATTTGTGATATCTGCCCCAAAGCCAGACAACACCAATTGCCTTTTCCCTTAAGCTCAATTCAAACCTCAGCACCTTTTGATCTTATTCATGTTGACCTATGGGGACCATATCATGACAAGACATATCATGGTTACTCTTACTTTCTCACCATTGTTGATGACTACACCAGAAATACTTGGACTCATTTACTTCAAACTAAGAGCAATGCTTGGGGTCTTATTGTTGCTTTTATCCAATTAATTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198470.p1 GENE.R_Transcript_198470~~R_Transcript_198470.p1 ORF type:internal len:224 (+),score=39.27,gag_pre-integrs|PF13976.2|1.8e+03,gag_pre-integrs|PF13976.2|1.4e-09 R_Transcript_198470:2-670(+)
FTKTQCILQGLSLRRPQALGNVHGGLYLFHMPPESQQLTVPVISSACSQNKPVHACDHVNIADSVHAVTSGNACTENNVHDNNKIVPVVDNTFVCTADSYLQCHASMKDNFLLWHKRLGHLQFYKLKTLPFLHGSMDSSPFICDICPKARQHQLPFPLSSIQTSAPFDLIHVDLWGPYHDKTYHGYSYFLTIVDDYTRNTWTHLLQTKSNAWGLIVAFIQLIA

Click here to download the sequence:
Link to NCBI Protein BLAST