Transcript Information: R_Transcript_19850.p1


Annotated TAIR IDAT4G12740.1
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7494578-7497596 | Reverse length=630
E-Value9E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8674562545917
Replicate 23.9839134123232
Replicate 35.5798463375243
Condition 2: 8 Hour
Replicate 12.385802225629
Replicate 20.8026983225041
Replicate 31.9082462447074
Condition 3: 24 Hour
Replicate 12.0014498608768
Replicate 23.8455323193827
Replicate 31.5714249518798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19850.p1 GENE.R_Transcript_19850~~R_Transcript_19850.p1 ORF type:3prime_partial len:390 (+),score=78.41,NUDIX_4|PF14815.2|3.7e-14,HhH-GPD|PF00730.21|2.4e+02,HhH-GPD|PF00730.21|1.7e-08 R_Transcript_19850:572-1738(+)
ATGTTTGAATTGAAAGTTGCAACCTCCATATTCAGGCGGGAAGAACACAAAAACAAAAATCCTAAAAATTTCAAATCAATTCCCCCAAAATTTCTCTCTCCCCTGGCTGCTCTACTCTTCCTCCCTTCACCACTCCCACAATTCCCAAACTCAATGCCAAAAACCACAACCACCAAAAATGGAACTTTATCCACTAGACCCAAGAGAAAACGACCCCCAAGACCGAATATTTCCCCAAAAACTGCCACCAAATGCGAGACTGTAGATATAGAGGACTTATTGAAGTTCAATGAAGAAGAAATTGCTGAAATTAGGGCATCTCTGTTAGACTGGTATGATAAGAATAAAAGGGTCTTGCCTTGGAGAAGATTGGCTTCAAATTCTGATAAACAACAAGAAGAAGATGAAAATGAAGGAGAGAGAAGGGCTTATGGGGTTTGGGTTTCGGAAGTGATGCTTCAACAAACTAGGGTTTCTACTGTTATTGATTATTATAACAAGTGGATGACCAAATGGCCCTCTGTTCTTCATCTCTCTCAAGCTTCCCTTGAGGAGGTAAACCAAATGTGGGCAGGATTGGGATATTATAGAAGGGCCAGGTTTTTGTTCGAGGAGGATGGCTCGACCAAAGTTACCGACTTTCCACAGAAAGTTGTAAAAGCAAGGCAGAGAAATGAATTTTCTGCTGTCTGTGTTGTGGAAATAACAGATTCCAAGGATCTAGAAAGTGATCAGGCCAATAGACACTACCTTCTTGTAAAGAGGCCAGATGAAGGCCTGCTAGCTGGACTTTGGGAGTTCCCATCTGTGCTAATGAAAAAGGAGACAGAAATGGCAAGTAGGAGGAAAGCAATCGATAGTTTCTTGAAGACGTCATTCAGTATTGATAGTAAGAAAACCTGTGAAGTGATCTCAAGAGTTGATGTTGGGGAGTATGTCCATATCTTCTCTCACATACGTCTAAAGATGTATATTGAATTGTTGAGTTTACATTTAAAAGGTGGGCTGAATTTCCAGCAAAGTGTGCCTGCTGAAGGACCTATGGTATGGAAATGTGTTGATAGCAAGGAACTTTCAAGGATGGGTCTCACATCTGGTGTCAAAAAGGTTTACACAATGGTTCAAAAGTTTAAACAGAGTAACTTGACCACTGCCAAGGAAGATACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19850.p1 GENE.R_Transcript_19850~~R_Transcript_19850.p1 ORF type:3prime_partial len:390 (+),score=78.41,NUDIX_4|PF14815.2|3.7e-14,HhH-GPD|PF00730.21|2.4e+02,HhH-GPD|PF00730.21|1.7e-08 R_Transcript_19850:572-1738(+)
MFELKVATSIFRREEHKNKNPKNFKSIPPKFLSPLAALLFLPSPLPQFPNSMPKTTTTKNGTLSTRPKRKRPPRPNISPKTATKCETVDIEDLLKFNEEEIAEIRASLLDWYDKNKRVLPWRRLASNSDKQQEEDENEGERRAYGVWVSEVMLQQTRVSTVIDYYNKWMTKWPSVLHLSQASLEEVNQMWAGLGYYRRARFLFEEDGSTKVTDFPQKVVKARQRNEFSAVCVVEITDSKDLESDQANRHYLLVKRPDEGLLAGLWEFPSVLMKKETEMASRRKAIDSFLKTSFSIDSKKTCEVISRVDVGEYVHIFSHIRLKMYIELLSLHLKGGLNFQQSVPAEGPMVWKCVDSKELSRMGLTSGVKKVYTMVQKFKQSNLTTAKEDT

Click here to download the sequence:
Link to NCBI Protein BLAST