Transcript Information: R_Transcript_198556.p2


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73817121508054
Replicate 20
Replicate 30.58951162931275
Condition 2: 8 Hour
Replicate 10.81019406075444
Replicate 20.24662737324837
Replicate 30.66733862574952
Condition 3: 24 Hour
Replicate 10.42201851521515
Replicate 20.24325653188137
Replicate 30.24140850757607


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198556.p2 GENE.R_Transcript_198556~~R_Transcript_198556.p2 ORF type:complete len:272 (+),score=43.60,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.2e-14,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|60,PPR_1|PF12854.3|2.2e-13,PPR_1|PF12854.3|7e-08,PPR_1|PF12854.3|4.8e-07,PPR_1|PF12854.3|58,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|40,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.44,PPR|PF01535.16|9.8,PPR|PF01535.16|0.00023,PPR|PF01535.16|93,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|60,PPR_3|PF13812.2|47,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|4.1e+03 R_Transcript_198556:957-1772(+)
ATGGTCGAGCAAGGGTGTGAGCCGAATGTGGTGACTTATAATGCAGTTGTTAATGGGTTTTGCTTGTTTGGTAAGGTTGATGAGGCTAAGAGAATGATGACAAAGATGAGGTTGAATGGTGTGAAAGATGATATTATCACTCACACAAGCTTGCTTAAGGGGTTTTGTGTTATTGGGAGATTAGACGAGGCTTTTAAACATTTAAGGGAGATGATTAGCTTAGGAATAAAACCTGACGTGAAAGCATATAGTGTCGTTTTGAATGAGTGTTGTCAATTAGGGAAGTTGAATGAGGCGATTGCTCTGTTAAGGGAGATGAAATTCAGAGGCATTGATCCAAGTGTTTCTAGTTTCAATGCCGTGTTTAGAGTACTTGTAGAAAAAGACGAACTAGATGTAGCTGTACTTCTTTTGAAAAGGATGCCTGATATGGGTCGTGCTCCGAATTTCTTGTCATATTTTACTGTGATATCAAGCCTTTGTAAGACTGAAGAAAGGGTAGAGGAAGTCGAGGAACTCGTACAATGCATGCTCCACAAAGGTCACAAGCCTGACGCTTCGTTGTACAGTTGCTTGATCAAGATGTATTGCAAATCTGGAGATCTTGATATGGCCATTCAAGTCTTGTACGATGCTTTGAGCACAGGGCATGTGATTAGACTTGACAGCTTTGAAGAAATTATAGAGAAATTATGTGCGAAAGGAAGAATTCTGGAGGCTGAACACCATTTCAACAAATTGTCAACAAGTTGTCAAGTTATGCAACTAGATGATTACAAAAGGGTTTTGGACGAGCTAATATGTAAATTTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198556.p2 GENE.R_Transcript_198556~~R_Transcript_198556.p2 ORF type:complete len:272 (+),score=43.60,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.2e-14,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|60,PPR_1|PF12854.3|2.2e-13,PPR_1|PF12854.3|7e-08,PPR_1|PF12854.3|4.8e-07,PPR_1|PF12854.3|58,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|40,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.44,PPR|PF01535.16|9.8,PPR|PF01535.16|0.00023,PPR|PF01535.16|93,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|60,PPR_3|PF13812.2|47,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|4.1e+03 R_Transcript_198556:957-1772(+)
MVEQGCEPNVVTYNAVVNGFCLFGKVDEAKRMMTKMRLNGVKDDIITHTSLLKGFCVIGRLDEAFKHLREMISLGIKPDVKAYSVVLNECCQLGKLNEAIALLREMKFRGIDPSVSSFNAVFRVLVEKDELDVAVLLLKRMPDMGRAPNFLSYFTVISSLCKTEERVEEVEELVQCMLHKGHKPDASLYSCLIKMYCKSGDLDMAIQVLYDALSTGHVIRLDSFEEIIEKLCAKGRILEAEHHFNKLSTSCQVMQLDDYKRVLDELICKFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST