Transcript Information: R_Transcript_198739.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11626089780076
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15596092323086
Replicate 20.56970399595377
Replicate 30.11561535426998
Condition 3: 24 Hour
Replicate 10.29245614302808
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198739.p1 GENE.R_Transcript_198739~~R_Transcript_198739.p1 ORF type:complete len:157 (+),score=33.11,HMG_box_2|PF09011.6|0.017,HMG_box_2|PF09011.6|0.00029,HMG_box|PF00505.15|0.18,HMG_box|PF00505.15|0.00013 R_Transcript_198739:28-471(+)
ATGGAAGCTTATTGTGCTGCACGAACGAAATGGGAATCATTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCATGAGCGTAGCAGAAAACGCAAGTTTCCTGTTGTTGCTAAGGAAAAAATAGAAAACCCAAGCAAGGATGATGACACAGTGTTAGAAACAAAAGTCACCTATGGTAAATTTACATTGGATAAGGAAGCTTTGTGTTTCTACATAAGAACCTCTGTGATGGAATATATGAAGAAGCATCCAAAGAATGGATATCCAACAGAACTTTCTTTTGCTGGGCACCGTAAATGGCCTTCCTTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCGTGAGTTTTACAGAAAATGGAAGAATAGGAGAGATCACCCTTTAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198739.p1 GENE.R_Transcript_198739~~R_Transcript_198739.p1 ORF type:complete len:157 (+),score=33.11,HMG_box_2|PF09011.6|0.017,HMG_box_2|PF09011.6|0.00029,HMG_box|PF00505.15|0.18,HMG_box|PF00505.15|0.00013 R_Transcript_198739:28-471(+)
MEAYCAARTKWESLSRKEKAPFLQKARDKRAASHERSRKRKFPVVAKEKIENPSKDDDTVLETKVTYGKFTLDKEALCFYIRTSVMEYMKKHPKNGYPTELSFAGHRKWPSLSRKEKAPFLQKARDKRAASREFYRKWKNRRDHPLA*

Click here to download the sequence:
Link to NCBI Protein BLAST