Transcript Information: R_Transcript_198747.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1319665708353
Replicate 21.3020961498479
Replicate 30.355143218545
Condition 2: 8 Hour
Replicate 11.1388774394068
Replicate 22.9467828782958
Replicate 31.9699422378714
Condition 3: 24 Hour
Replicate 11.0678049873351
Replicate 21.0258259949106
Replicate 32.5450819403369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_198747.p1 GENE.R_Transcript_198747~~R_Transcript_198747.p1 ORF type:complete len:129 (+),score=29.46,HMG_box_2|PF09011.6|0.01,HMG_box_2|PF09011.6|0.0035,HMG_box|PF00505.15|0.13,HMG_box|PF00505.15|0.00049 R_Transcript_198747:28-387(+)
ATGGAAGCTTATTGTGCTGCACGAACGAAATGGGAATCATTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCATGAGCGTAGCAGAAAACGCAAGTTTCCTGTTGTTGCTAAGGAAAAAATAGACAACCCAAGCAAAAAAAGCTCTGTGATGGAATATATGAAGAAGCATCCAAAGAATGGATATCCAACAGAACTTTCTTTTGCTGGGCACCGTAAATGGCCTTCCTTGTCTCGTAAGGAAAAAGCTCCGTTTTTACAAAAGGCCAGGGATAAGAGAGCTGCATCTCGTGACCTTTACAGAAAATGGAAGAATAGAGAGATCACCCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_198747.p1 GENE.R_Transcript_198747~~R_Transcript_198747.p1 ORF type:complete len:129 (+),score=29.46,HMG_box_2|PF09011.6|0.01,HMG_box_2|PF09011.6|0.0035,HMG_box|PF00505.15|0.13,HMG_box|PF00505.15|0.00049 R_Transcript_198747:28-387(+)
MEAYCAARTKWESLSRKEKAPFLQKARDKRAASHERSRKRKFPVVAKEKIDNPSKKSSVMEYMKKHPKNGYPTELSFAGHRKWPSLSRKEKAPFLQKARDKRAASRDLYRKWKNREITL*

Click here to download the sequence:
Link to NCBI Protein BLAST