Transcript Information: R_Transcript_199001.p1


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value2E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6016663804237
Replicate 21.6151000320229
Replicate 32.3839591163417
Condition 2: 8 Hour
Replicate 11.772732303873
Replicate 21.7706580643473
Replicate 31.4784117247374
Condition 3: 24 Hour
Replicate 11.8698666520302
Replicate 21.6466596004277
Replicate 31.4855908158528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199001.p1 GENE.R_Transcript_199001~~R_Transcript_199001.p1 ORF type:complete len:442 (+),score=118.81,XendoU|PF09412.6|2.4e-94 R_Transcript_199001:157-1482(+)
ATGGAGGGCTTAGTAAGGGGTCTGAGAAGCGTGGACATGCTTGGTGATCAGAGTGACAATGACGAGTCCCAGTACCATCATCCTAACGATGACAACAATTGTGATTTAGCTGATGATCAGCTTCGTTTTAGATCCATGTCCACCACCTGGGCCCAGGTGGTATCGGGGGAGCATCATGGTGATGTTGATGATCAAGGGGAGCATGATGATGGTGATGAGGAAGATGACGATGATCATCCAGTGAAGAATGATGATGATGACCAAGCTGAACAAGATGGTGATGATGATGACCAAGCTGAACAAGATGGTGATGATGATGAAGCTGAGAAGGATGATGATGATGATCAGGAAGAATTGGAAGAAAGCACTGGTGGTTGGAAAATTGCTCGCAAAAAGATTCATATGTGGCTACAGAAGATACGTAAGGACCTTTGGAAACTGTACAAACGTCCACTCAGTGAGCAGGAGTACTCTGAGGAAGTCACAGATGTTGCGGAGCCATCTGAAGAGGAACTTGCTGACTACAAAATAGCCTGTGAAAAGCTTTGGGAACTCGATTTCAATCGCTTGACACCTGTAAAAGACTACGAAATTGATGTTGGCGAAGGAAAGAAAGTCTATGACACACAAGATATGGCAGATGAAAATCTATTTACATGGGTTGACGACAATGTTCTCAGAAGGCCTACATTTTCGCGTTTCTGTGCCCTCCTTGACAATTACAACCCGTATCAAGAATATGAGGAAATTGTGACTGATCAAGAGTTACAAGAACAAGCTGCATTCATAGAAGAGATCAGTAGAACAGCTCCTATTAAGTACCTTTACAAGTATCTTTCTTGCAATGGACTTTTCACTGAGGATTACCAGGAATTCAAGACCACTTTGATAGATCTGTGGTTCACTCTTTATGATCGAGGTGGTACCTCCGACTCCTCTTCTCCATTTGAGCATGTTTTTGTCGGAGAAATCAAGAGCCGCGGGGAACAACAAGTTTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAATGGTGGCATTAACTATCAAGGTTACATCTTGCCTCGCAGACATCAGGAATTTCCAGATGCCGAGACACAACTACTCACAGTTCAGTTTGAGTGGAAAGGAATCCTGAAACCTCTGTCAAGCATGTTCATAGGAGTAAGTCCGGAGTTCGAAATAGCCCTCTATACATTGTGTTTCTTTGCAGGTGAGGAGGATAACCGCATTCAAGTTGGTCCATACCCTGTTAATATCAAGTGCTATCATATGGGAGACAAAATTGGCTCTGCCTTCCCAATTGCTGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199001.p1 GENE.R_Transcript_199001~~R_Transcript_199001.p1 ORF type:complete len:442 (+),score=118.81,XendoU|PF09412.6|2.4e-94 R_Transcript_199001:157-1482(+)
MEGLVRGLRSVDMLGDQSDNDESQYHHPNDDNNCDLADDQLRFRSMSTTWAQVVSGEHHGDVDDQGEHDDGDEEDDDDHPVKNDDDDQAEQDGDDDDQAEQDGDDDEAEKDDDDDQEELEESTGGWKIARKKIHMWLQKIRKDLWKLYKRPLSEQEYSEEVTDVAEPSEEELADYKIACEKLWELDFNRLTPVKDYEIDVGEGKKVYDTQDMADENLFTWVDDNVLRRPTFSRFCALLDNYNPYQEYEEIVTDQELQEQAAFIEEISRTAPIKYLYKYLSCNGLFTEDYQEFKTTLIDLWFTLYDRGGTSDSSSPFEHVFVGEIKSRGEQQVSGFHNWLQFYLEEANGGINYQGYILPRRHQEFPDAETQLLTVQFEWKGILKPLSSMFIGVSPEFEIALYTLCFFAGEEDNRIQVGPYPVNIKCYHMGDKIGSAFPIAES*

Click here to download the sequence:
Link to NCBI Protein BLAST