Transcript Information: R_Transcript_199090.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3068784275179
Replicate 22.3591348782357
Replicate 34.8902024081674
Condition 2: 8 Hour
Replicate 18.528784419827
Replicate 23.7686879507616
Replicate 35.5066683904545
Condition 3: 24 Hour
Replicate 17.7385867059677
Replicate 24.9562379529387
Replicate 32.705221927594


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199090.p1 GENE.R_Transcript_199090~~R_Transcript_199090.p1 ORF type:internal len:89 (+),score=30.64 R_Transcript_199090:1-264(+)
CAACAGCAGCAGCAACTAGAAAGGCTAGAAAGGGGGGATTTCTCATGCTCTAGTCCTTCTGGACTTGATTCTAGAGAGCCTTTTGACTTCCAGCTTGGGGGAAGAATGTTCTACAGTACACAAGAGATGCTGTTGAAGAAAAAGCTCGAGGAGCAAGCTGATTTGCAGCAGGCCCTTGAACTTCAAGGTAGGAGGCTGATGAATTTGCAGCTCATGGATTTGAAGAATCATCAATACCACCAGCAGACTGTCGGGTCTCCGGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199090.p1 GENE.R_Transcript_199090~~R_Transcript_199090.p1 ORF type:internal len:89 (+),score=30.64 R_Transcript_199090:1-264(+)
QQQQQLERLERGDFSCSSPSGLDSREPFDFQLGGRMFYSTQEMLLKKKLEEQADLQQALELQGRRLMNLQLMDLKNHQYHQQTVGSPV

Click here to download the sequence:
Link to NCBI Protein BLAST