Transcript Information: R_Transcript_199148.p1


Annotated TAIR IDAT5G14770.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4772881-4775697 | Reverse length=938
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.28471935985169
Replicate 20.26001025396727
Replicate 31.0553261988597
Condition 3: 24 Hour
Replicate 10.80085374050131
Replicate 20
Replicate 31.0180327761348


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199148.p1 GENE.R_Transcript_199148~~R_Transcript_199148.p1 ORF type:internal len:86 (-),score=6.53,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|3e-16,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|2.2e-05,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.13,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|45 R_Transcript_199148:2-256(-)
TTGGATGTTGTTTTATATACGAGTATGATGGATGGACTATTTAAGTCTGGAAAACCCAAAGAGGCTGAAGACATGTATAAGACTATAGAAACACATAACTTGATACCCAATCGTATAACCTATTCTGCCCTCATTGATGGTCGTTGCAAGTTAGGAGATATAACAGGTGCCGAATCCCTGCTACAAGAGATGGACGTTAAAGGCGTTCCCCCAAATGTCATCACTTATTCATCTATGATAAATGGTTATGTTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199148.p1 GENE.R_Transcript_199148~~R_Transcript_199148.p1 ORF type:internal len:86 (-),score=6.53,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|3e-16,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|2.2e-05,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.13,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|45 R_Transcript_199148:2-256(-)
LDVVLYTSMMDGLFKSGKPKEAEDMYKTIETHNLIPNRITYSALIDGRCKLGDITGAESLLQEMDVKGVPPNVITYSSMINGYVK

Click here to download the sequence:
Link to NCBI Protein BLAST