Transcript Information: R_Transcript_199322.p1


Annotated TAIR IDAT1G63490.1
Annotated Gene Nametranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23544938-23551946 | Reverse length=1116
E-Value1.4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0845786751818
Replicate 22.0555818589383
Replicate 32.7231785953468
Condition 2: 8 Hour
Replicate 13.0821368465064
Replicate 23.4401356678747
Replicate 34.4427019000947
Condition 3: 24 Hour
Replicate 13.5319703427237
Replicate 22.1592561151614
Replicate 33.979582670345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199322.p1 GENE.R_Transcript_199322~~R_Transcript_199322.p1 ORF type:internal len:143 (+),score=23.96,zf-C5HC2|PF02928.12|8.1e+03,zf-C5HC2|PF02928.12|1.8e-16 R_Transcript_199322:1-426(+)
CCTCATGGAGGGTTTGGATCGGAGCTCTATCAATTGTATCATAAGCCTGCTGTGCTTTCTCATGAAGAGCTGCTTTGTGTGGTGGCCAAGATCAGTTGTGACGCCAAGGTAGCACCCTACATGAATAAAGAGTTGCTGAGAGTATTTTCTAAAGAAAAGAGTTGGAGAGAGCGACTCTGGAAGAAGGGCATCGTCAAAACATCTGTTATGTCACCCCGGAAACATCCTGACTATGTCGGTACTGAGGAGGATCCTACTTGCATTATATGCCAGCAGTATCTGTATCTTTCAGCAGTTGTTTGTCGTTGCAGACAATCTACTTTTGTGTGTTTGGAGCATTGGGAACGCCTTTGTGAATGCACTCCAAGAAAACGACGTCTCCTTTATCGTCATTCTCTTGCTGAATTATATGAGCTGATACTGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199322.p1 GENE.R_Transcript_199322~~R_Transcript_199322.p1 ORF type:internal len:143 (+),score=23.96,zf-C5HC2|PF02928.12|8.1e+03,zf-C5HC2|PF02928.12|1.8e-16 R_Transcript_199322:1-426(+)
PHGGFGSELYQLYHKPAVLSHEELLCVVAKISCDAKVAPYMNKELLRVFSKEKSWRERLWKKGIVKTSVMSPRKHPDYVGTEEDPTCIICQQYLYLSAVVCRCRQSTFVCLEHWERLCECTPRKRRLLYRHSLAELYELILM

Click here to download the sequence:
Link to NCBI Protein BLAST