Transcript Information: R_Transcript_1994.p1


Annotated TAIR IDAT5G64200.1
Annotated Gene NameOrtholog of human splicing factor SC35
Annotated Gene Symbol(s)ATSC35, SC35, At-SC35
Annotation TypeHomolog
Chromosome Positionchr5:25681849-25683553 | Reverse length=303
E-Value2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.766936218367
Replicate 261.29304621527
Replicate 373.301560307688
Condition 2: 8 Hour
Replicate 175.90618133646
Replicate 287.981469705896
Replicate 388.384380943884
Condition 3: 24 Hour
Replicate 192.537622979361
Replicate 272.697526420095
Replicate 380.563589943695


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1994.p1 GENE.R_Transcript_1994~~R_Transcript_1994.p1 ORF type:complete len:260 (+),score=34.34,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|6.2e-13,RRM_5|PF13893.2|7.7e-06 R_Transcript_1994:190-969(+)
ATGTCGCACTTTGGGAGATCGGGTCCTCCTGATATCAGAGACACTTACTCTCTCCTCGTCCTCAACATTACCTTCCGGACAACCGCCGATGATTTGTACCCATTGTTCGATCGGTACGGCAAGGTCGTCGATGTCTTCATCCCCCGTGACCGCAGAACCGGTGAATCTCGGGGATTTGCATTTGTTCGTTACAAGTATCAAGATGAGGCTTCCAAGGCTGTCGAGAAGCTTGATGGAAAAGTCGTTGACGGGAGAGAGATTATGGTTCAGTTTGCTAAATATGGTCCCAATGCTGAGCGAATTCACAAGGGAAGAATTTTGGAGCCAGTAAAGTCAAAGGGAAGGTCTAGAAGCCCTCGTCCAAGGCACCGAGATGAATACAGGGACAGGGATTACAGAAGGAGAAGTCGTAGCAGGAGCAGAGATAGATATGACAAGGACAGGTATCGTGGTAGGGGCAGAGATCATCATCGAAGTAGGAGCTACAGTAGAAGCCCTGACTACCGCAAAGACCTTGGTAGAGGAGGATATGATGATGAGAGGCGGAGCCGGAGCCGAAGCCACAGCAGGAGCCGAAGCCGTTCTTACGGAAGTGCCTCTCCTCGTAGAGGTAGCCCCAATCCCAGGAGAAGCCCCTCTCCTAGAAGATCTCCTAGGGCCGAAAGTCCTGATGGACGTGCTAGTGAGAGACGGTCTCCAACTCCGAAGAGTGTTTCACCACATGAACGGCGAGCCGATTACCGCAGTCAGTCTTCTCGTAAATCTGATGGAGATGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1994.p1 GENE.R_Transcript_1994~~R_Transcript_1994.p1 ORF type:complete len:260 (+),score=34.34,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|6.2e-13,RRM_5|PF13893.2|7.7e-06 R_Transcript_1994:190-969(+)
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDVFIPRDRRTGESRGFAFVRYKYQDEASKAVEKLDGKVVDGREIMVQFAKYGPNAERIHKGRILEPVKSKGRSRSPRPRHRDEYRDRDYRRRSRSRSRDRYDKDRYRGRGRDHHRSRSYSRSPDYRKDLGRGGYDDERRSRSRSHSRSRSRSYGSASPRRGSPNPRRSPSPRRSPRAESPDGRASERRSPTPKSVSPHERRADYRSQSSRKSDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST