Transcript Information: R_Transcript_199474.p1


Annotated TAIR IDAT5G08450.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2727970-2732572 | Reverse length=918
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1207958480968
Replicate 20.55253422148153
Replicate 31.0046814735155
Condition 2: 8 Hour
Replicate 10.85915315604369
Replicate 20.58844425897857
Replicate 30.63689861825919
Condition 3: 24 Hour
Replicate 10.60415282178169
Replicate 20.19346718325068
Replicate 30.95998704767094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199474.p1 GENE.R_Transcript_199474~~R_Transcript_199474.p1 ORF type:internal len:114 (-),score=42.61 R_Transcript_199474:2-340(-)
TGGGAGCGGGAGAGGAAAGATATTTCAAAAGAGAAGGAAAGATTAAAAGAAAGGGAAAGTCTTGTTGACAGAGATTGTCATAACGGTGGTGAGAAAGACAGTTACCATAATGAGAAAGATGCAGCAGATAAAACACCCGTACAGGAAAGTTTTCCAGCAGAACAGAAGAAGCCAAAGGAACATGAGTCTTGGAGAAATGTAGAGAGAGAAGCTAAAGAGAGGAGGAAAGAGAGAGAAGGTGATGTGGAGGGAGAGAGACCTGAGAAGCGCAGTAGAGGCTATGACAAAGAGTCAGACGAAGGAGGTGCTGAGGTTGATGGGGCTACAGACAGAGAAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199474.p1 GENE.R_Transcript_199474~~R_Transcript_199474.p1 ORF type:internal len:114 (-),score=42.61 R_Transcript_199474:2-340(-)
WERERKDISKEKERLKERESLVDRDCHNGGEKDSYHNEKDAADKTPVQESFPAEQKKPKEHESWRNVEREAKERRKEREGDVEGERPEKRSRGYDKESDEGGAEVDGATDRER

Click here to download the sequence:
Link to NCBI Protein BLAST