Transcript Information: R_Transcript_199515.p1


Annotated TAIR IDAT3G49170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2261
Annotation TypeHomolog
Chromosome Positionchr3:18226954-18229600 | Reverse length=850
E-Value3E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27973886520642
Replicate 20
Replicate 30.087765278146178
Condition 2: 8 Hour
Replicate 10.18763114902104
Replicate 20.085673876786152
Replicate 30.13909280168879
Condition 3: 24 Hour
Replicate 10.087960947232583
Replicate 20.084502907626733
Replicate 30.16772187499538


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199515.p1 GENE.R_Transcript_199515~~R_Transcript_199515.p1 ORF type:internal len:261 (+),score=36.84,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.00048,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|0.68,PPR_2|PF13041.2|8.1e-05,PPR|PF01535.16|41,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.0049,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.6e-06,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|31,PPR_3|PF13812.2|0.028,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.053,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.66 R_Transcript_199515:2-781(+)
CCACAACCACCCCTCCATTCTCCAAAACCCTCAAAAAACCCATCACCCCAAAAACAACACCCACTTCCTAAATCCATCAAAGTTCCCACCTTTCAACTCCTAAACAACCGTTTGATCCATCAAGCCAATGCGGGTCACCTACATGAAGCAATCTCAGCCCTTCATCTCATGTCCCAACATGGGTTAACCCGTAACGTCACCGCTTTCTCTCTCCTCCTCAAATCCTCCATTAGAACCCAACATTTTGAACTGGGAAAACTCTTACACTCCAAACTCATCGAATCAAGACTCGTTATTGACTCGGTTCTTCTTAACTCACTCCTTTCCTTGTATTTCAAATTTGGGGAATGGCATAAAGCTTTAGAAATTTTTGAAATGATGGGTGAGAAAAGAAATTTGGTATCTTTGAGTGCAATGATATCTTGTTTCGTGAACAATGGGTTAGAAAATAAGGCTATTGAAACAGTTGTTGAGATGTTAGGTTTAGGGTATTGCCCTAATGAGTTTTGCTTGTCTGTTATGATTAGGGCTTGCTCTAATTATGAATGGGCTTGGTTTGGGGAAATATTACATGGATTTGTTTTAAAGACAGGAAATTTTGATTTGTGTGTTGGGTGTGGTTTGGTTGATATGTATGTGAAAGGGTTTGAGGACTTGGATAGTGCCCTCAAGGTGTTTGATAAAATGCCTGAGAGAAATGTGGTGGTTTGGACTTTGATGATCACAAGATATGTGAAGATGGGTTTCCCTGAAAAGGCTATGAAACTGTTTTTGGAGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199515.p1 GENE.R_Transcript_199515~~R_Transcript_199515.p1 ORF type:internal len:261 (+),score=36.84,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.00048,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|0.68,PPR_2|PF13041.2|8.1e-05,PPR|PF01535.16|41,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.0049,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.6e-06,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|31,PPR_3|PF13812.2|0.028,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.053,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.66 R_Transcript_199515:2-781(+)
PQPPLHSPKPSKNPSPQKQHPLPKSIKVPTFQLLNNRLIHQANAGHLHEAISALHLMSQHGLTRNVTAFSLLLKSSIRTQHFELGKLLHSKLIESRLVIDSVLLNSLLSLYFKFGEWHKALEIFEMMGEKRNLVSLSAMISCFVNNGLENKAIETVVEMLGLGYCPNEFCLSVMIRACSNYEWAWFGEILHGFVLKTGNFDLCVGCGLVDMYVKGFEDLDSALKVFDKMPERNVVVWTLMITRYVKMGFPEKAMKLFLEM

Click here to download the sequence:
Link to NCBI Protein BLAST