Transcript Information: R_Transcript_199521.p1


Annotated TAIR IDAT3G20730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7247095-7248878 | Forward length=564
E-Value2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38954489842388
Replicate 20.1280262220506
Replicate 30.48886330235691
Condition 2: 8 Hour
Replicate 10
Replicate 20.34086710123759
Replicate 30.38738193397167
Condition 3: 24 Hour
Replicate 10.34996657359305
Replicate 20.47069150071354
Replicate 30.26692322788899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199521.p1 GENE.R_Transcript_199521~~R_Transcript_199521.p1 ORF type:complete len:328 (+),score=59.97,PPR|PF01535.16|45,PPR|PF01535.16|0.046,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.012,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.4,PPR|PF01535.16|15,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|33,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|33,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|19,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.085,PPR_3|PF13812.2|70,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|22 R_Transcript_199521:262-1245(+)
ATGGGTAGATTAGATGAAGCTTTCAAGCTCTTTTTCAGAAACCCAATTCCTTCGGACACATCGTTTTACTTAAAATTACTAGATCTATGCATCGAAGCAAGAGCCAACAAACATGGCCGTCTAATTCATGCACACCTGTTCTATAATGGTTTTGAATCAAATTTGACATTGAATACCAAAATGATCATATTCTATAGCAAAGTTGGTGACATGGGTAATGCTCACACGGTGTTTGATAAAATGCCTGAACGAAATATTGTATCTTGGACTGCCTTGTTATCTGGGTACTCCCAAAATGGGTTCTTTAAGGATGCCCTGATGGTTTTTCAGAATATGCATCATTCAGGGTTGAAGTGTAATCAGTTTACTTATGGCAGTGCCTTGAGGGCATGTACCAAGTTGATGTGTCTAAGGAGCGGAAAACAAATACAAGGGTGTTTGCAAAAGAGTAGGTTTGTTGGTAATGTGTTTGTGCAGAGTGCATTGGTTGACCTCCATTCCAAGTGCGGAGATATAGAGGATGCTAGTTATGTCTTTAAGATGATGCATGAGAGGGATTTGGTTTGCTGGAATGCTATGATTGGTGGATATTCTGTTCAAGGGTTTCCAAATTATGCATTTGGAGTCTTCCAGTCTATGCTTAGAGAAGATCTCTTTGCTCGTGGTGGCCAGTTAAAAGAAGCAGTAGATCTGATGCAGAATATGAATATCCCATTGACTGCCTCGCTTTGGAGTGCAATTCTTAGCGCTTCTAATGTCTATGGAGATATGTCTCTAGGAAAAGAAGCAGCCAAGTGCCTTCTTGATTTGGATGGTGAAAATTCTGCTCCTTATGTTGCTCTGGCTAGTGCATATGCTGCGGTTGGTTTGTGGGATGATTCCCAGGTGATTCATGAACTTATGGAACTGAAAAAATTGAAAAAGAGCCCTGGCCTCAGTCTTGTCTTGTCACCTGACAAGAGAATAGAAGTGCTGCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199521.p1 GENE.R_Transcript_199521~~R_Transcript_199521.p1 ORF type:complete len:328 (+),score=59.97,PPR|PF01535.16|45,PPR|PF01535.16|0.046,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.012,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.4,PPR|PF01535.16|15,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|33,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|33,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|19,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.085,PPR_3|PF13812.2|70,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|22 R_Transcript_199521:262-1245(+)
MGRLDEAFKLFFRNPIPSDTSFYLKLLDLCIEARANKHGRLIHAHLFYNGFESNLTLNTKMIIFYSKVGDMGNAHTVFDKMPERNIVSWTALLSGYSQNGFFKDALMVFQNMHHSGLKCNQFTYGSALRACTKLMCLRSGKQIQGCLQKSRFVGNVFVQSALVDLHSKCGDIEDASYVFKMMHERDLVCWNAMIGGYSVQGFPNYAFGVFQSMLREDLFARGGQLKEAVDLMQNMNIPLTASLWSAILSASNVYGDMSLGKEAAKCLLDLDGENSAPYVALASAYAAVGLWDDSQVIHELMELKKLKKSPGLSLVLSPDKRIEVLQG*

Click here to download the sequence:
Link to NCBI Protein BLAST