Transcript Information: R_Transcript_19958.p1


Annotated TAIR IDAT1G02080.1
Annotated Gene Nametranscription regulators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:373335-386682 | Forward length=2431
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.861023131854
Replicate 215.022993948658
Replicate 319.284732078812
Condition 2: 8 Hour
Replicate 118.147643495699
Replicate 220.640814007248
Replicate 325.498691109591
Condition 3: 24 Hour
Replicate 125.186312324899
Replicate 218.110087428466
Replicate 324.052422732854


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19958.p1 GENE.R_Transcript_19958~~R_Transcript_19958.p1 ORF type:5prime_partial len:1638 (+),score=368.03,Not1|PF04054.11|2.9e-152,CNOT1_CAF1_bind|PF16415.1|2.7e-93,CNOT1_CAF1_bind|PF16415.1|5.8e+03,DUF3819|PF12842.3|1.1e-51,CNOT1_TTP_bind|PF16417.1|1.8e-16,CNOT1_TTP_bind|PF16417.1|1.3e+03 R_Transcript_19958:2-4915(+)
GATGCGTTGCGCAAGCCTGCCGATTCAAAGATGTTTGCATTTGGTACCAAGGCCTTGGAGAAGTTTGTCAACCGTTTAGATGAATGGCCCCAATATTGCAACCATATCTTACAGATAGCTCACCTTCGTAATACTCACCCTGAACTTGTTGTATATATCGAAGGGGTTCTTACTCGAATATCTCATGGTGGAAATGGTCCTGACCAACCTAACATTTCTACTATAGCAACACCTATCACTGAGATAGTTGGATCTACTGGTTCACATCAAGGGCAACCACCTTCATCTTCTATTACGATCCAGCCAAGGCAGCCAGTGGTGGTTGATGATGGAAATAAGGGTTCTACAAGTATGAATGACTTTACAAAACCACCTTTAGCTGCTCCTGTTCAATCTTCTACCACCTCATCTGCTGAATCAATTGGAGCTCCGAAGAGTGCGCCTATTGCCCCTGGAATGTTGTCTCCTTCTCCTGGATTTGCTCGTACCCGAGGGATTACTTCTGCCAGGTTTGGCTCTGCTTTGAACATAGAGACTCTTGTTGCTGCTGCTGAGCGAAGGGAAACTCCTATAGAGGCCCCATCTTCGGATGTTCAGGACAAGATATCATTTATTATAAATAACATCTCTGCTGCTAATGTTGAGACTAAAGCCAAAGAATTTTCAGAGATTCTGAGAGAGCAATACTATCCATGGTTTGCACAGTATATGGTGATGAAAAGAGCGAGCATTGAGCCAAACTTCCATGAGTTGTATTTAAAGTTCCTAGACAAGATTAATTCAAAAGGCTTGAACAAGGAAATTGTTCAGGCAACCTATGAAAACTGCAAGGTTCTTTTAGGTTCTGAGCTGATAAAGTCAAGTTCTGAGGAGCGCTCTTTGCTGAAGAATTTGGGAAGCTGGCTTGGGAAACTTACTATTGGTAGAAATCAAGTTCTGAGAGCACGTGATATTGATCCCAAATCTTTGATTATAGAGGCCTACGAGAAAGGGTTGATGATTGCTGTGATTCCTTTTACTTCAAAGATATTGGAACCATGTCAAAGCAGTCTTGCTTATCAACCTCCCAATCCATGGACAATGGGGATTCTGGCATTGCTTGCTGAGATCTATGCAATGCCAAATTTGAAGATGAATCTCAAATTTGACATTGAGGTTCTGTTTAAAAATCTCAGTGTTCAGATAAAAGATGTAACTCCAACTTCTCTTTTGAGAGACCGTGTGAGAGTGATTGAGGGAAATCCTGATTTTTCAAACAAAGATACTGGAGCCCCGCAACCAACAACTGTTGCTGAAGATAAATCTGGAGTAATATCTGCACTAAACCAGGTTGAATTGCCCCTTGAGGTTGCTACCCCATCTCACCTTGGTGGTCATGCCCATCAATTATCTCCGTATGCTGCTTCTGCTGGTACCTTGATTGAGGATGATAAGCTGACTGCTATAGGGTTTTCGGACCAGCTTCCTTCGGCGCAAGGGTTGTTGCAAGCTAATGCTTCAGCGTCACCATATAGTATGGGCCAGCTCCCCTCATCAATTCCTAATCTTGGAGTACATGTTGTTGTGAATGCAAAGCTCAATAACTTGGGCCTGCACGGGCATTTTCAGAGAGTGCTTCCACTAGCCATGGATAGGGCTATCAAAGAAATAGTGCCTGGCATAGTGCAGCGTAGTGTTTCTATCGCGACTCAAACAACTAAGGAGCTTGTTATTAAGGATTATGCCTTGGAGTCAGATGAGGGTCGCATCTATAATGCTGCACATCTAATGGTGGCTAGTCTTGCTGGTAGCCTAGCACATGTGACTTGCAAGGAACCTCTTCGTGGCTCAATTTCAAGTCAACTTCGGAACATGCTTCAGCTTCAGCAGCTAAATCTTACTAGTGAAATTGTAGAGCAGGCTGTGCTGGTTGTCACCAATGATAACCTTGATTTGGGTTGTGCAATAATTGAACAAGCAGCAACAGATAAGGCGGTTCAAACTATCGATGGGGAGATCGCCCAGCAACTTTCTTTGAGAAGGAAGCACAGAGAAACTCTTGGTTCGTCGATATATGATGCGAGTATATATGCACAAGGTCCTATGGGTGTTCTGCCAGAAACACTTCGTCCTACACCTGGGCGTTTATCCCTCTCTCAGCAACGAGTTTATGAGGATTTTGTCCGCCTTCCATGGCAAAATCAACAGTCAAGTCAGAGTGCAAATGCTTCTCTTGCTGGTCATTCACCACCGTCTTCTGGTGGGAGCTTCCCACGCACGTTCAGTGGCTCTTCAGGACAAATAAATGCGAATGTCTACTCCTCTGGACTTGTGAACACAGGTTTTGGAGTCGCTGGTCAGCCTGTTGATCTTGGTTCTGAGGACTTGGAACCGTCTCCAGTACAGATACTCAGCTCTGCTGCTCTAAATCATGTCAGACCCTCTGATGGTGCGGTTCAGCAACGTTCTGAGGTTGATTCAATCCTTGTGTCCTCATCCTCAAGTGGGCCAACCCCAGAACCCCAGCCTGTTGACTCCTCGGAACCTGGACTTTCTTCGCAGCCACCACCTGTGGGGTCTGCTTCGGTAGGATCTGGTCCCACAGAGCCTTTATTGACAACAGGGGATGCTCTTGACAAATACCAGATAGTTGCACTGAAGCTGGAAAGCGCACTGTCTAATGATGGCAGAGAGACAGAAATTCAGTCTATTGTTGCGGAGGTTCCACAAATCATACTAAGATGTGTTAGTCGAGATGAGGCTGGCCTGGCTGTGGCACAAAAGGTTTTTAAAGGTTTATATGAAAGTGGAGGTAATAGTCTCCATGTTGGCGCTCATCTTGCCATTCTGGCTGCAGTTCGTGATGTCTGCAAACTTGTGGTTAAGGAGCTGACTAGCTGGGTGATTTACTCAGATGAAGAAAGAAAGTACAACAAGGATATTACTGTTGGCCTTATTAGGAGGGAGTTGCTGAACTTGGGAGAATATAATATCCATATGGCAAAGCTTCTTGATGCTGGAAGGAACAAAGCTGCAACAGAATTTGCAGTATCCCTTCTTCAAACATTGGTCAATGAAGAGCCTAAAGTGATATCAGAGCTTCAAAATTTAGTGGAAGCATTGGCCAAGCTTGCTGCAAGGCCTGGGTCTCCTGAGTCGTTGCAGCAACTAGTTGAAAGGGTGAAGAATCCTGGTGCTTCTGCTGGTCTTACCAGTCCTAACACGGCAAAGGATGATAAAAGCCGGCAACTTAGAGAGAAAAAGGTCACCCAATCTTTGGTGAATAGGGGAGACTATAACATTGAAGTCATAGAACCAGATGCTTCTAGCTTCCAAAAGCAGGTTTCCTTACTTTTTGCGGAATGGTACCGGATATGTGAGCTTCCTGTTGGAAGTGATACTCCCTGTACAAAATTCATTGTACAGCTACATCAAAATGGGTTTCTGAGAGGGGATGATATAACAGACCGCTTTTTCCGGGTTCTCTTGGAAATTTCTGTTTCGCACTTTGGTGAGGTCATGCAATCTTCTCAGCAAGTGCAGTCATCATTCCTTGCCATTGATATTTATTCCAAATTAGTTCATTCAATTTTGAAGTATTCCCCAGTTGACCAGGGATCAACAAAGCTTTTTATCTTACCAAAGATCTTAGCAGTAACAGTACGGTTAATTCAAAAAGATCATGATGAGAAGCAAGAGGACTTTAATCCAAGGCCTTACTTTCGGTTGTTCATAAATTGGTTGGCAGACATTGGTTCCTTGGATCCTGTCCATGATGGTGTGAATTTCCAGGTTTTGTCAGCTTTTGCAAATGCCTTCCATGCCTTGCAGCCCCTTAGAGTACCTGCATTCAGCTTTGCATGGCTTGAACTGGTTAGCCACAAGACTTTCATGCCAAAATTGCTTACGGGTAACTCCCAGAAGGGTTGGCCTTTTCTGCACCGCTTGTTAGTGGACTTGTTCCAGTTCATGGAACCGTTCTTGAGAAATGCTGAACTTGGGGACCTGATCCGTTTTCTGTACAAAGGAACCTTGAGAGTGTTGCTGGTGTTGCTGCATGATTTTCCAGAATTCCTGTGTGACTACCATTTCAGTTTCTGTGATGTAATTCCTCCAAGCTGTATACAGATGCGCAATATTATCCTCAGCGCTTTCCCGCGCAACATGAGACTTCCAGATCCTTCTACACCTAATTTGAAGATTGATTTGCTGCAAGAGATGAGCATATCACCTCGTATTCTGTCTGAGGTTGATGCAGCTCTGAAGGCAAAGCAGATGAAGGCTGATGTGGATGAGTACCTGAGGACAAGGCAACAGGGGTCGTCATTCCTGAGTGAGCTGAAGCAAAGACTTCTACTTCCACCTAGTGAGGCCACACTTACTGGGACTCGTTATAATGTGCCATTGATCAATTCACTAGTGCTTTATGTTGGGATGCAGGCTATTCAGCTGCTGCAGGCACGAAATAGATCTCAACCACAATCGGTGAGCGGTGATCAACTGGTGGATAAAGCAGCGCTTGACATTTTTCAAACATTAATAATGGATTTGGATACTGAGGGTCGCTATCTCTTCCTGAATGCCATTGCTAACCAATTGCGTTATCCGAACACCCATACACATTACTTCTCTTTTGTCCTCCTCTTCTTGTTCTCTGATGCACACCAGGAAATTATTCAGGAGCAAATCACAAGAGTCCTGTTGGAAAGACTAATTGTTAATAGGCCACATCCATGGGGCCTGCTTATTACTTTCATTGAACTTATCAAGAACCCCGGGTACAATTTCTGGAACCGTTCCTTCACAAGATGTGCACCTGAAATCGAAAAATTGTTCGAGTCTGTTTCAAGATCATGTGGGGGTCCCAGGCCGGTGAACGATAACATGATCGGATCAGGAGGATTGTCTGATAGTGCGCATAACCGTTTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19958.p1 GENE.R_Transcript_19958~~R_Transcript_19958.p1 ORF type:5prime_partial len:1638 (+),score=368.03,Not1|PF04054.11|2.9e-152,CNOT1_CAF1_bind|PF16415.1|2.7e-93,CNOT1_CAF1_bind|PF16415.1|5.8e+03,DUF3819|PF12842.3|1.1e-51,CNOT1_TTP_bind|PF16417.1|1.8e-16,CNOT1_TTP_bind|PF16417.1|1.3e+03 R_Transcript_19958:2-4915(+)
DALRKPADSKMFAFGTKALEKFVNRLDEWPQYCNHILQIAHLRNTHPELVVYIEGVLTRISHGGNGPDQPNISTIATPITEIVGSTGSHQGQPPSSSITIQPRQPVVVDDGNKGSTSMNDFTKPPLAAPVQSSTTSSAESIGAPKSAPIAPGMLSPSPGFARTRGITSARFGSALNIETLVAAAERRETPIEAPSSDVQDKISFIINNISAANVETKAKEFSEILREQYYPWFAQYMVMKRASIEPNFHELYLKFLDKINSKGLNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRARDIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYAMPNLKMNLKFDIEVLFKNLSVQIKDVTPTSLLRDRVRVIEGNPDFSNKDTGAPQPTTVAEDKSGVISALNQVELPLEVATPSHLGGHAHQLSPYAASAGTLIEDDKLTAIGFSDQLPSAQGLLQANASASPYSMGQLPSSIPNLGVHVVVNAKLNNLGLHGHFQRVLPLAMDRAIKEIVPGIVQRSVSIATQTTKELVIKDYALESDEGRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNMLQLQQLNLTSEIVEQAVLVVTNDNLDLGCAIIEQAATDKAVQTIDGEIAQQLSLRRKHRETLGSSIYDASIYAQGPMGVLPETLRPTPGRLSLSQQRVYEDFVRLPWQNQQSSQSANASLAGHSPPSSGGSFPRTFSGSSGQINANVYSSGLVNTGFGVAGQPVDLGSEDLEPSPVQILSSAALNHVRPSDGAVQQRSEVDSILVSSSSSGPTPEPQPVDSSEPGLSSQPPPVGSASVGSGPTEPLLTTGDALDKYQIVALKLESALSNDGRETEIQSIVAEVPQIILRCVSRDEAGLAVAQKVFKGLYESGGNSLHVGAHLAILAAVRDVCKLVVKELTSWVIYSDEERKYNKDITVGLIRRELLNLGEYNIHMAKLLDAGRNKAATEFAVSLLQTLVNEEPKVISELQNLVEALAKLAARPGSPESLQQLVERVKNPGASAGLTSPNTAKDDKSRQLREKKVTQSLVNRGDYNIEVIEPDASSFQKQVSLLFAEWYRICELPVGSDTPCTKFIVQLHQNGFLRGDDITDRFFRVLLEISVSHFGEVMQSSQQVQSSFLAIDIYSKLVHSILKYSPVDQGSTKLFILPKILAVTVRLIQKDHDEKQEDFNPRPYFRLFINWLADIGSLDPVHDGVNFQVLSAFANAFHALQPLRVPAFSFAWLELVSHKTFMPKLLTGNSQKGWPFLHRLLVDLFQFMEPFLRNAELGDLIRFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLQEMSISPRILSEVDAALKAKQMKADVDEYLRTRQQGSSFLSELKQRLLLPPSEATLTGTRYNVPLINSLVLYVGMQAIQLLQARNRSQPQSVSGDQLVDKAALDIFQTLIMDLDTEGRYLFLNAIANQLRYPNTHTHYFSFVLLFLFSDAHQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPGYNFWNRSFTRCAPEIEKLFESVSRSCGGPRPVNDNMIGSGGLSDSAHNRLE*

Click here to download the sequence:
Link to NCBI Protein BLAST