Transcript Information: R_Transcript_199615.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value3.4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.892075220916
Replicate 23.7127604394673
Replicate 33.4918807311208
Condition 2: 8 Hour
Replicate 12.0902567637892
Replicate 22.3178962884156
Replicate 31.2174860781967
Condition 3: 24 Hour
Replicate 13.7796389948049
Replicate 21.748282716936
Replicate 31.334616139445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199615.p1 GENE.R_Transcript_199615~~R_Transcript_199615.p1 ORF type:complete len:164 (-),score=33.74,zf-RING_2|PF13639.2|8.4e-13,zf-RING_11|PF17123.1|1.8e-08,zf-rbx1|PF12678.3|9e-07 R_Transcript_199615:404-895(-)
ATGATGTCACCATTGAGTTTCTTGGTGATGCTGTTAATAATGATGATAATACCCACAATTCTATACAGTTTCTTCTTCCTCATCAACTGCCCTCCAACCCCTTTTCGGCTCCGACGTCGCCGGTCTCGGATGACCGGCGACAAGGGCTCGAAAAATGGGGAAAACAAAGAAAAAGAGACCAAAAATGGTGACATAGAGCTTGTGATAACAGTGAGCTCGGAGTTGGGGAAAGATGCAGAGTGCCCTGTTTGTCTCTCTGCTTTTGTAGAGGGTGAGGAGTTAAAGCAGCTCAAGATCTGCAAGCATGTGTTCCACAAATCATGTATTGACAAGTGGCTTTCTTGTCATTGTAATTGCCCTCTTTGCAGGGCTTTTGTTTTCTCTCATTTCAAGGCTAAGGAAAAAAGAGATAGCCATCGTTTGTTGGGGAGAGATGTTGGTGATAGAGATGATCATTGGCAAGGTTTGCCTGATTCAGCTGGCTTGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199615.p1 GENE.R_Transcript_199615~~R_Transcript_199615.p1 ORF type:complete len:164 (-),score=33.74,zf-RING_2|PF13639.2|8.4e-13,zf-RING_11|PF17123.1|1.8e-08,zf-rbx1|PF12678.3|9e-07 R_Transcript_199615:404-895(-)
MMSPLSFLVMLLIMMIIPTILYSFFFLINCPPTPFRLRRRRSRMTGDKGSKNGENKEKETKNGDIELVITVSSELGKDAECPVCLSAFVEGEELKQLKICKHVFHKSCIDKWLSCHCNCPLCRAFVFSHFKAKEKRDSHRLLGRDVGDRDDHWQGLPDSAGLI*

Click here to download the sequence:
Link to NCBI Protein BLAST