Transcript Information: R_Transcript_199778.p1


Annotated TAIR IDAT5G37570.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14924494-14926146 | Reverse length=550
E-Value6E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5128580250758
Replicate 21.2484286734015
Replicate 30.86674142255712
Condition 2: 8 Hour
Replicate 11.3235602674187
Replicate 21.7727545964183
Replicate 31.7006914455137
Condition 3: 24 Hour
Replicate 12.4405596872695
Replicate 21.8280034395794
Replicate 32.4845502617559


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199778.p1 GENE.R_Transcript_199778~~R_Transcript_199778.p1 ORF type:complete len:555 (+),score=101.69,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|0.076,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|4.4e-07,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|1e+02,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.0012,PPR|PF01535.16|2.2,PPR|PF01535.16|5.9e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|21,PPR|PF01535.16|0.047,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.19,PPR|PF01535.16|1.5,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|5.2e-05,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.099,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|0.00016,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|5.4e-05,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|4.1e-06,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|5.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3.4,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|5.6e+02 R_Transcript_199778:1144-2808(+)
ATGAAACTAACAGAGCTATCAGCTAGCTCTCTCTTGAAAAATTGCAAATCCATCTCTCAACTGAAACAAATACATGCACATATCTTACGTTTCAATCTCCTAAATTTCTCCTCTGTAATTTCATCTCTTATCCCACTCTACGTTTCTCTCTCTCCTTTCCAAATTCATCTCTTGTTATCCTCACTCTCTCATTATCCAACATTATCCCTCTGCAATTACTCAATCAGAGCCTTCTCTAAAACCCCATCTCTTTGCTTTGAATCATTGAATTTGTACCTTCAAATGGTCCGTACTAATATAAAACCTGATAATTACACTTACCCATTTCTTTTTAAATCTTGTGCTGCTCTTTGTGCACTTAATCAGGGTACTGAGGCTCATGGTCGAGCTTTCAAAACTGGGTTTTTTTCCTTTGTGGAGGTCTTCAATGCATTGGTTGACATGTATGGGAAATGTAGTGAACTGTGTGGTGCACGCCAATTGTTTGATGAAATGCCTCAAAGAGATGTGGTTTCTTATAATGCACTTCTGGGAGCACACGCGAGGTTAGGAGAGGATATGATGAGTGCCCAGATGGTTTTTGATCGAATGCCGGGGAGAAATGTGATTTCTTGGAATGCAATGATTGTGGGTTATGTGAATTCTGGTGATTTGGATTCAGCTCGGGCTGTCTTTGATAAGATGTCTGAGAGGAATGTTGTTACTTGGACGACGATGTTGGTGGGTTATACCAAAAATGGGATGATGGATTCAGCTAGGGTCCTTTTCGACGTGATGCCTGAGAAGTCTTTAGTTTGTTGGACAGCTATGATTTCTGGGTATGCTCAAAATGGACGGCCAAATGAAGCTTTGGCGGTTTTTCATAGAATGGAGAGAGCAAAAATGAGGCCTGATGCTTTTGTTATGACCTCTATCATCTCTGCATTGGCACAAATAGGGCGTCCTGATTTGGCCAATTGGATCACTACTGTAGCGGAACAGGAATGCATTGAGCGGAACGAGAGAGTTCTTACAGCCTTGCTTGACATGCATGCAAAATGTGGCAATATTGAACAAGCATGTCAACTGTTTGAGGAAATCCCTCAGCCTGATGTATTTCCTTATAGTGCATTGATAACAGGGCTTGCTTCACATGGACACAGCATGAGAGCGCTTGAAGTTTTTCACAAAATGCAAATGGCTAATGTAGAACCTGATTATATAACCTTTGTTGGTGTACTGAATGCATGTAGCCATACAGGACTTGTTGAAGATGGCTTGAAATATTGGGATAGCATGATTAATAATTACAGGATTGAACCAGATGCTGATCATTATGCTTGCATTGTTGATATGCTTGGGCGTGCTGGTAGACTTGATCAAGCATACAAAATGGTCCAGAGTATGCCAATGGGACCTCGTCCTGGAGCTTTAGGTGCTCTCCTTGCTGCCTGTCGAACGTATAACAATGTTGAAATTGCAGAAAATGTTGCTCAGGAACTCTTTCAATTAGAACCTCTAAATACAGGGAACTATGTGCTACTTTCTGGAATCTATGCTGCTAGAGAGCAATGGGATGAGGCTGCAAGAGTAAGGAAGGTTATGAAGGAGAACATCACAGCTAAGCTACCTGGTTATAGTTGGGCTGAACTCGAGAGAAATGAAAGAACTCCACATAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199778.p1 GENE.R_Transcript_199778~~R_Transcript_199778.p1 ORF type:complete len:555 (+),score=101.69,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|0.076,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|4.4e-07,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|1e+02,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.0012,PPR|PF01535.16|2.2,PPR|PF01535.16|5.9e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|21,PPR|PF01535.16|0.047,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.19,PPR|PF01535.16|1.5,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|7.9e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|5.2e-05,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.099,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|0.00016,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|5.4e-05,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|4.1e-06,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|5.3e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3.4,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|5.6e+02 R_Transcript_199778:1144-2808(+)
MKLTELSASSLLKNCKSISQLKQIHAHILRFNLLNFSSVISSLIPLYVSLSPFQIHLLLSSLSHYPTLSLCNYSIRAFSKTPSLCFESLNLYLQMVRTNIKPDNYTYPFLFKSCAALCALNQGTEAHGRAFKTGFFSFVEVFNALVDMYGKCSELCGARQLFDEMPQRDVVSYNALLGAHARLGEDMMSAQMVFDRMPGRNVISWNAMIVGYVNSGDLDSARAVFDKMSERNVVTWTTMLVGYTKNGMMDSARVLFDVMPEKSLVCWTAMISGYAQNGRPNEALAVFHRMERAKMRPDAFVMTSIISALAQIGRPDLANWITTVAEQECIERNERVLTALLDMHAKCGNIEQACQLFEEIPQPDVFPYSALITGLASHGHSMRALEVFHKMQMANVEPDYITFVGVLNACSHTGLVEDGLKYWDSMINNYRIEPDADHYACIVDMLGRAGRLDQAYKMVQSMPMGPRPGALGALLAACRTYNNVEIAENVAQELFQLEPLNTGNYVLLSGIYAAREQWDEAARVRKVMKENITAKLPGYSWAELERNERTPHKR*

Click here to download the sequence:
Link to NCBI Protein BLAST