Transcript Information: R_Transcript_199834.p1


Annotated TAIR IDAT3G46510.1
Annotated Gene Nameplant U-box 13
Annotated Gene Symbol(s)PUB13, ATPUB13
Annotation TypeHomolog
Chromosome Positionchr3:17124106-17126539 | Reverse length=660
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5611085027062
Replicate 21.1050684429631
Replicate 31.2056177682186
Condition 2: 8 Hour
Replicate 11.4498209508237
Replicate 21.1768885179571
Replicate 31.3136034001596
Condition 3: 24 Hour
Replicate 12.1145348762359
Replicate 21.4510038743801
Replicate 32.015972800109


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199834.p1 GENE.R_Transcript_199834~~R_Transcript_199834.p1 ORF type:5prime_partial len:152 (-),score=12.76 R_Transcript_199834:46-501(-)
CTCACATACAAATTCATAGAGCAGCTAGCACTTGAGCTTAATTGGATGGAGACAAGTACGGCATCGACAATGGTATTGGAGGATGAGAAAGGAGGACAAGAAGAGCAAAGGGAGTTACTGAAGATAATAACCGATACAATCGAAGAAATCAATTCAATAACAGACTACCGTCCTTTTATCAAGAAACAGTTTTGTAATCTTGCTAGAAGACTCAAGCTTCTTCTCCCAATGTTCGACGAAATCAAGGAAGCTAATCAACTTTTGTCTCTCGACTCTCTTCAATCCTTTCATCTTTTGTCTCATTCCCTTCAACCCGCTTTGTTTCTCCTCCGATTTGGCTCTCGTGCCAGCAAGATTTTTCTGGTTTGTTCCCTTTTCTTTATTATACGCGTTTCTTGGGTAATCTTGATTTACTGCTTTCTTTCTTTGCTTAGTCACTTTGGAATTCCTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199834.p1 GENE.R_Transcript_199834~~R_Transcript_199834.p1 ORF type:5prime_partial len:152 (-),score=12.76 R_Transcript_199834:46-501(-)
LTYKFIEQLALELNWMETSTASTMVLEDEKGGQEEQRELLKIITDTIEEINSITDYRPFIKKQFCNLARRLKLLLPMFDEIKEANQLLSLDSLQSFHLLSHSLQPALFLLRFGSRASKIFLVCSLFFIIRVSWVILIYCFLSLLSHFGIPR*

Click here to download the sequence:
Link to NCBI Protein BLAST