Transcript Information: R_Transcript_199835.p1


Annotated TAIR IDAT3G46510.1
Annotated Gene Nameplant U-box 13
Annotated Gene Symbol(s)PUB13, ATPUB13
Annotation TypeHomolog
Chromosome Positionchr3:17124106-17126539 | Reverse length=660
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94820576388149
Replicate 20.40901883927853
Replicate 30.89247029595399
Condition 2: 8 Hour
Replicate 10.63599649213624
Replicate 21.0164037200539
Replicate 31.7680140214663
Condition 3: 24 Hour
Replicate 11.7889200437172
Replicate 20.71607983410965
Replicate 31.4212795251232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_199835.p1 GENE.R_Transcript_199835~~R_Transcript_199835.p1 ORF type:5prime_partial len:154 (-),score=19.82 R_Transcript_199835:30-491(-)
CTCACATACAAATTCATAGAGCAGCTAGCACTTGAGCTTAATTGGATGGAGACAAGTACGGCATCGACAATGGTATTGGAGGATGAGAAAGGAGGACAAGAAGAGCAAAGGGAGTTACTGAAGATAATAACCGATACAATCGAAGAAATCAATTCAATAACAGACTACCGTCCTTGTATCAAGAAACAGTTCTGTAATCTTGCAAGAAGGCTCAAGCTTCTTCTCCCAATGTTCGACGAAATCAAGGAAGCTAATCAACCTCCGTCTCTGGACTCTCTTCAATCCTTTCACCTTTTGTCTCATTCCCTTCAACCCGCTTTGTTTCTCCTCCGATTTGGCTCTCGTGCCAGCAAGATTTTTCTGGTTTGTTCCTTTCTTTTTCCTTTTCTTTATTGTACGCTTTTCTTGGGTAATCTTGAATTACTGCTTTCTTTGTTTGCTCAGTCAGTTTGGAATTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_199835.p1 GENE.R_Transcript_199835~~R_Transcript_199835.p1 ORF type:5prime_partial len:154 (-),score=19.82 R_Transcript_199835:30-491(-)
LTYKFIEQLALELNWMETSTASTMVLEDEKGGQEEQRELLKIITDTIEEINSITDYRPCIKKQFCNLARRLKLLLPMFDEIKEANQPPSLDSLQSFHLLSHSLQPALFLLRFGSRASKIFLVCSFLFPFLYCTLFLGNLELLLSLFAQSVWNS*

Click here to download the sequence:
Link to NCBI Protein BLAST