Transcript Information: R_Transcript_19987.p1


Annotated TAIR IDAT3G02650.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:568135-569865 | Forward length=576
E-Value1.5E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.565159405161
Replicate 216.590985269731
Replicate 319.418401921612
Condition 2: 8 Hour
Replicate 114.666660222208
Replicate 217.063887834813
Replicate 322.144350689169
Condition 3: 24 Hour
Replicate 129.950032779289
Replicate 228.80991516671
Replicate 327.146679417082


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19987.p1 GENE.R_Transcript_19987~~R_Transcript_19987.p1 ORF type:complete len:591 (+),score=142.53,PPR_2|PF13041.2|4.1e-06,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|3.5,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.05,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|0.00039,PPR|PF01535.16|0.06,PPR|PF01535.16|0.75,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.00038,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|0.26,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.8,PPR_1|PF12854.3|0.00084,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|8.1e-07,PPR_3|PF13812.2|0.0068 R_Transcript_19987:196-1968(+)
ATGTGGAGATCCATAGCATCAAGATCTTCTCTTCCTAGACACCTGGGTCGAAAGCTGCTAATCCCTCTCCAAATCCCACCACCACAATCATCATCAACATCTCAGGTACTACTACTTCACAAAACCCTTAATCCATCTTCACATTTTGCACAACCCACGAAATTCCCACTTCAAAATGTCAGATTTTTCTCACAATCATCTATTAGTGAATTTGAAACTGAACCACATGATGCTAGTTCTTCTTCTTCTGAGGAGTTAGACCTTGAAAATGGTAATATGTCTAAGGGTTTTGGTCAGACCCATGACGTTAGTTCTTCCCAAGACTTGGGATTGTCTATTGAATTTGATGGTATTAGTGAAAATAATGATGCCCAGATGGTTAGTTTTGGCTCTAATGATTTGAGTTCTAATGACGAGATTGATGTTGAAAAGTTGGAAAATGTGTTGTCTGTGCTTCAAAGTAGTCTAGATGAGTCTTTAGAGTCTAGTCTTGATAGAATGGATTTGGTTTTGAATGAGGAGTTTGTGATGAGAGTGTTGGAAACTCCTCTTGTTCCTGGGGATCATTTGATTAACTTTTTCAAATGGGGTTTAAGTAGGAATGAGTTTAAGGTGAGTTCGTCAGTTTTGGGTGGTCTTGTACGTGCCATTTGTAATGAACCGAAAAGGAATAATGCCTATGCATTGTGGGATTTGGTTAAGGAGATTGGTGAGAAGGAGAAGGGTGTTGTTAGTTCTGAAATGCTCAATGAGTTGATATCTGCTTTTTCGATGTTGGGTAAGGGAAAAGCTGCGTTTGAGGTATTTGGAAAGTTTGAGGAACTTGGGTGCGTTCCGAATGAGGATACATATTATTATACCATTGAAGCACTTTGTAGGAGATCCTTTTTTGATTGGGCTATGTCAGTTTGCCAGAAAATGATCGATGCTGGGGTTCTGCCGGATAGTAAGAAGGTTGGTGCGATCATATCTTTCTTCTGCAAAGGCCGTAGAGAGAAGGAGGCCCATGTTGTATACCTCGCAGCAAAGGAGAAAAATCGATATCCTCCTCAGAAGGCTGTTAATTTTTTGATAAGCTGTCTCTCGAAGGTGGATGAAACTGTGCCCTTGGCTCAAGAGATGCTAGTTGATTTCTCAGTCGAAGTTCGTAAGCGTGCCATCAATCCGTTCTCATGGGTCATTACTGGTTTGTGTAGGAAAAAGGACACCGAGGGTGCGAAGAAGTTACTGTTTGAGATGATAGAGAAAGGCCCACCTCCTGGAAATGGAGTCTTTAATTCCATTATAAACTGTCTTTCGAAAGCTGGGGACTTGGCGGATGCAAAGGAGATGATGAAAGTGATGGAGACCAGGGGTCTCAAGCCTGATGTCTACACTTACAGTGTTATAATGAGTGGTTATGCAAAGGGGGGCGCAATGGAAGAAGCTTGCAAATTCTTGTCAGAGGCCAAAAAGAAACATGACAAGCTGTGTCCTGTAACTTTCCACACATTAATTCGAGGATACTGTAAACTAGGAGAATTTGACAAGGCCTTGAAGTTGTTGAGTGAGATGAAGAACTATGGGGTTGAAGCTAATGTAGACGAGTACAATAAGTTGATCCAGTCACTGTGCTTGAAGGCTTTGGATTGGGAAGCAGCAGAGAAGCTGCTGGAAGACATGAAAGCAAAAGGCTTGCATCTCCCTGGTATTACACGAGGCCTCATAAAAGCCGTAAAGGAGTTGGAACAAGAGGAGGCAGTTGTATCTGAAGAAGCTGCTGCCAAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19987.p1 GENE.R_Transcript_19987~~R_Transcript_19987.p1 ORF type:complete len:591 (+),score=142.53,PPR_2|PF13041.2|4.1e-06,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|3.5,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.05,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|0.00039,PPR|PF01535.16|0.06,PPR|PF01535.16|0.75,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.00038,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|0.26,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|0.8,PPR_1|PF12854.3|0.00084,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|8.1e-07,PPR_3|PF13812.2|0.0068 R_Transcript_19987:196-1968(+)
MWRSIASRSSLPRHLGRKLLIPLQIPPPQSSSTSQVLLLHKTLNPSSHFAQPTKFPLQNVRFFSQSSISEFETEPHDASSSSSEELDLENGNMSKGFGQTHDVSSSQDLGLSIEFDGISENNDAQMVSFGSNDLSSNDEIDVEKLENVLSVLQSSLDESLESSLDRMDLVLNEEFVMRVLETPLVPGDHLINFFKWGLSRNEFKVSSSVLGGLVRAICNEPKRNNAYALWDLVKEIGEKEKGVVSSEMLNELISAFSMLGKGKAAFEVFGKFEELGCVPNEDTYYYTIEALCRRSFFDWAMSVCQKMIDAGVLPDSKKVGAIISFFCKGRREKEAHVVYLAAKEKNRYPPQKAVNFLISCLSKVDETVPLAQEMLVDFSVEVRKRAINPFSWVITGLCRKKDTEGAKKLLFEMIEKGPPPGNGVFNSIINCLSKAGDLADAKEMMKVMETRGLKPDVYTYSVIMSGYAKGGAMEEACKFLSEAKKKHDKLCPVTFHTLIRGYCKLGEFDKALKLLSEMKNYGVEANVDEYNKLIQSLCLKALDWEAAEKLLEDMKAKGLHLPGITRGLIKAVKELEQEEAVVSEEAAAKA*

Click here to download the sequence:
Link to NCBI Protein BLAST