Transcript Information: R_Transcript_19993.p1


Annotated TAIR IDAT5G60190.1
Annotated Gene NameCysteine proteinases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24235319-24235999 | Forward length=226
E-Value2.1E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.290121775558
Replicate 213.028954276185
Replicate 319.838870953811
Condition 2: 8 Hour
Replicate 113.336051444482
Replicate 214.77415407364
Replicate 315.882659292839
Condition 3: 24 Hour
Replicate 120.088081324241
Replicate 216.836827099503
Replicate 320.715149078671


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19993.p1 GENE.R_Transcript_19993~~R_Transcript_19993.p1 ORF type:complete len:224 (+),score=38.09,Peptidase_C48|PF02902.15|2.3e-11 R_Transcript_19993:230-901(+)
ATGGGGAGACCTTCTGCAGATGATATGATTCTTAGCCATAATGATGTGGTGCTTCGACGATCTGACTTGGAAATCCTTAGTGGACCTCATTATCTCAATGATCGCATAATTGAATTCTACTTCAGTTATCTATCTTCAAATTATGCCTCTGGTGATGTCTATCTAGTTCCACCTTCTATTGCCTTTTGGTTACAAAATTGCACAGATAAACAAACTCTCAAGGCTTTCGTTGAACCTCTGAATCTCTCTGCTAGAAAGCTGGTCATTTTCCCAGTCAACAATAACAATGATGTTACACAAGCTAATGCTGGAGATCATTGGAGTTTACTTGCCTTTGACAGGACTGCGAATTCGTTTGTCCATCATGATAGCTGTATGCCATTAAACAGCCCTTGCTCGTTGAAGCTTTATTATAGTGTGGCTGGGTTCATGGGCTCAGATTCTGATATACAGTATATGGAGTGCAAGTCCTCTCCACAACAACAAAATGGCTATGACTGTGGATTGTTCGTACTTGCCACTGCAAGAGTTATTTGCAGTTGGTATACGGAGGGTCGCCCTGTGAATGGGAAAGATCTTTGGTTTTCTGCAGTGGAAGAACAAGTGACGCAGCTTGCTGTTTCTAAGATGCGGACTGAGATTTTAGATCTGATCAAAGGGCTCATGGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19993.p1 GENE.R_Transcript_19993~~R_Transcript_19993.p1 ORF type:complete len:224 (+),score=38.09,Peptidase_C48|PF02902.15|2.3e-11 R_Transcript_19993:230-901(+)
MGRPSADDMILSHNDVVLRRSDLEILSGPHYLNDRIIEFYFSYLSSNYASGDVYLVPPSIAFWLQNCTDKQTLKAFVEPLNLSARKLVIFPVNNNNDVTQANAGDHWSLLAFDRTANSFVHHDSCMPLNSPCSLKLYYSVAGFMGSDSDIQYMECKSSPQQQNGYDCGLFVLATARVICSWYTEGRPVNGKDLWFSAVEEQVTQLAVSKMRTEILDLIKGLMA*

Click here to download the sequence:
Link to NCBI Protein BLAST