Transcript Information: R_Transcript_200.p2


Annotated TAIR IDAT3G09180.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2819278-2821096 | Forward length=402
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6488598286441
Replicate 26.7988020395632
Replicate 37.1992603873622
Condition 2: 8 Hour
Replicate 16.5295639859321
Replicate 27.6665880598351
Replicate 38.8164965870451
Condition 3: 24 Hour
Replicate 16.9966650598717
Replicate 25.2512521168041
Replicate 36.4620842408935


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200.p2 GENE.R_Transcript_200~~R_Transcript_200.p2 ORF type:complete len:105 (+),score=9.43,Med27|PF11571.4|1.1e-23 R_Transcript_200:1012-1326(+)
ATGAGGGAGGAAGTTATGTTCATGCTAGAGGAACTATCAAATATAGCTTTGCAACATTTTCTTGGAAATAAACCCGAGATGGCCCTGTACTACCTTCTGCAATGGATCAGCAGCTACCAAAGTCTATTTACCCAAGCGTGCAGCAAATGTGGACGGCTATTATCATTGGATAAACAATCAGCACTTTTATTGCCTCCAGTGCATCGTCCCTATCGGGACCTCTCTGCGGATAACACTGCATCAACCTCACTAAAGGATCAGAGTTCAAACACAGTGCAAGCGTATCATGTCAGCTGCTCTCCACCAGATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200.p2 GENE.R_Transcript_200~~R_Transcript_200.p2 ORF type:complete len:105 (+),score=9.43,Med27|PF11571.4|1.1e-23 R_Transcript_200:1012-1326(+)
MREEVMFMLEELSNIALQHFLGNKPEMALYYLLQWISSYQSLFTQACSKCGRLLSLDKQSALLLPPVHRPYRDLSADNTASTSLKDQSSNTVQAYHVSCSPPDI*

Click here to download the sequence:
Link to NCBI Protein BLAST