Transcript Information: R_Transcript_200249.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.280909540682
Replicate 22.8240637986834
Replicate 31.7414478874268
Condition 2: 8 Hour
Replicate 12.0046906974353
Replicate 23.7921963356397
Replicate 33.0783433215861
Condition 3: 24 Hour
Replicate 14.430454026399
Replicate 23.9983217871807
Replicate 35.1199309209117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200249.p1 GENE.R_Transcript_200249~~R_Transcript_200249.p1 ORF type:5prime_partial len:171 (+),score=-2.09,zf-RING_2|PF13639.2|7.2e+03,zf-RING_2|PF13639.2|2.6e+03,zf-RING_2|PF13639.2|2.9e-13,zf-RING_11|PF17123.1|2.2e-09,zf-rbx1|PF12678.3|2.8e-06,zf-C3HC4|PF00097.21|2.3e+03,zf-C3HC4|PF00097.21|4e-06 R_Transcript_200249:1-513(+)
GACCATTTCATTTCATCCTGTAATTTCCAACCAAAAAAAAAAAGTGTTAGTATGATGGAAGAATTTCAAGTGTCATACTGGGTGACATTTTCGATATTCTGTCTGATCACAATCACGTGTCTCACAATCTCTCTATATTTCCTCATCACGCGCTGCTGTGGCTGTTTACGTGGGCGCGTGGACCCCAACGAAGTGCTGGAGGATCCATACTCAGGGAATCCACGTGGCATTGATCAGACGGTGATTGAGAGCTTTCCTACGTTCAGGTACTCCGCGGAGCAGGGTAAGAAGCTGTGCTCCGGGATGGGTGTTTGTGTCATTTGTCTTGGGGTTTTCAAGGAGGGTGAAACGCTGCGTTCCATGCCTGACTGTCGCCACGTGTTCCATTCTCATTGCGTGGACTCTTGGCTTGTGTCTCATGATACGTGTCCTTATTGCCGGGCTAGCGTCGTTGATGCTGGCGGGTCGGGTTTCAGGAAATTTTTGCCCTCTGGTTTAGCAAGGTTGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200249.p1 GENE.R_Transcript_200249~~R_Transcript_200249.p1 ORF type:5prime_partial len:171 (+),score=-2.09,zf-RING_2|PF13639.2|7.2e+03,zf-RING_2|PF13639.2|2.6e+03,zf-RING_2|PF13639.2|2.9e-13,zf-RING_11|PF17123.1|2.2e-09,zf-rbx1|PF12678.3|2.8e-06,zf-C3HC4|PF00097.21|2.3e+03,zf-C3HC4|PF00097.21|4e-06 R_Transcript_200249:1-513(+)
DHFISSCNFQPKKKSVSMMEEFQVSYWVTFSIFCLITITCLTISLYFLITRCCGCLRGRVDPNEVLEDPYSGNPRGIDQTVIESFPTFRYSAEQGKKLCSGMGVCVICLGVFKEGETLRSMPDCRHVFHSHCVDSWLVSHDTCPYCRASVVDAGGSGFRKFLPSGLARLV*

Click here to download the sequence:
Link to NCBI Protein BLAST