Transcript Information: R_Transcript_20030.p1


Annotated TAIR IDAT5G17510.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5770518-5772343 | Reverse length=369
E-Value4.1E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.649297699535
Replicate 220.876663376889
Replicate 322.971998956825
Condition 2: 8 Hour
Replicate 122.253535379405
Replicate 231.152339659088
Replicate 325.701853214622
Condition 3: 24 Hour
Replicate 125.44326783925
Replicate 221.238397450185
Replicate 321.388839622809


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_20030.p1 GENE.R_Transcript_20030~~R_Transcript_20030.p1 ORF type:complete len:351 (+),score=94.39,GLTSCR1|PF15249.2|29,GLTSCR1|PF15249.2|1.3e-15 R_Transcript_20030:150-1055(+)
ATGGCTCGCTTCCCTTCTAACATCGACGCCCATTTACGCCCTCTGGGTGGCCCCCGCCCTCTCAACTTATCCCAAACCCCTAACCCCAGCCCTAACCCTAATTCCTCAAACCCTAATTCGAGCCCCCAGCAACAACACAAGGTTAGCAGACCACAGTCGCAGCCAATGCCGGCGCCTTTGGCTGGTAATCAGGCTGAGCTTCAGATGGCTTATCAAGATGCTTGGCGTGTTTGTCGTCCCGATTTTAAACGCCCTTTCGCCTCTCTTGAAGATGCTTGCGAAAGGCTCCTACCATACCATGTTGTGGCAGATTATGAAGCGGAGGAAGATGATAGAATACTTGATTCTGACACCACAGGTCAAATACTTTCTAGATCCCAGCAATGGGACCACAACATTGCTGCTAAAGTAGCGGAGTTCACTGCAACCTTTGAGAAACAGGCTCTAGCCTTCAATATAATAACTCGAAAGCGGGCTATGGGGGAGTTCCGATCTGAGGAGAGATTGATGATTGAACAGGCTCTGTTGCAAGAAGAAAAGCGAGCCATTATGGAGCTGAGGGCAGAAATTGAGTCTAGAGAGAAAGCTGGTCGAGAGGCACATGAGGCCAAGTTGCGGATGGAAGCAGCCATCCAGGCTGAGCAAGCTCGAGTTGAATCACAAGCACATGCTGATTTGATGACTCGAGCTCCAATTAGGGCTGGTCTTCTTGGATCACAAGGCAGTGATGACCAGGATCAAGGGATGAATCCAGATGAAATGATCAATGGGTGGGGGAACAATGCTCAGAGAGATGAGAGAGAACCCTCCGAAGATTTCCTGAATGATGAGGAAGCTGAAAATGGAGACACGGGAATGCAAGACGAGTGGCATGAAAGCGGGGAGTTTGATTTGAACACCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_20030.p1 GENE.R_Transcript_20030~~R_Transcript_20030.p1 ORF type:complete len:351 (+),score=94.39,GLTSCR1|PF15249.2|29,GLTSCR1|PF15249.2|1.3e-15 R_Transcript_20030:150-1055(+)
MARFPSNIDAHLRPLGGPRPLNLSQTPNPSPNPNSSNPNSSPQQQHKVSRPQSQPMPAPLAGNQAELQMAYQDAWRVCRPDFKRPFASLEDACERLLPYHVVADYEAEEDDRILDSDTTGQILSRSQQWDHNIAAKVAEFTATFEKQALAFNIITRKRAMGEFRSEERLMIEQALLQEEKRAIMELRAEIESREKAGREAHEAKLRMEAAIQAEQARVESQAHADLMTRAPIRAGLLGSQGSDDQDQGMNPDEMINGWGNNAQRDEREPSEDFLNDEEAENGDTGMQDEWHESGEFDLNTR*

Click here to download the sequence:
Link to NCBI Protein BLAST