Transcript Information: R_Transcript_200387.p1


Annotated TAIR IDAT4G16060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9094424-9096147 | Forward length=289
E-Value3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4709874043999
Replicate 26.8440979257546
Replicate 36.4543846265402
Condition 2: 8 Hour
Replicate 14.0584306542395
Replicate 25.5593352643832
Replicate 35.4153976436514
Condition 3: 24 Hour
Replicate 16.3419356982608
Replicate 27.3111355438378
Replicate 38.5857847114349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200387.p1 GENE.R_Transcript_200387~~R_Transcript_200387.p1 ORF type:complete len:181 (+),score=27.71 R_Transcript_200387:89-631(+)
ATGAACTCCAACCTTGTCCAACTCCGAACCCCTTCAAAAATCCACCCCCTTCACCAAAACCCACGAACCCCTTCACACTTAATCTCAATTTCACCCACTAAACCCATCATTGTTAAGACCACAACAACAAGTATCAACCTTGGGCTTCGATCGTCTGTTGCCAATACCACCACCAACAAGTACATTTACCAAGCAACACCAACCAATCATCAGACAGTCATGGTAGCATCGTCATCATCATCATTATCTGTCTCCGATGGTCAGTATAAACCAATTCAGCTTGATGATGTGCCTGATTTTGATAAAGTTGTCTCCTCTGATGGGCTCATCTCCATTTGTGGCTTTGGCTCTCTCCTCTCTGAAAGGAGTGCAAGGAGTACGTTCCCGGAATTGATCAACTTTAGGGTAGGGAGATTGAAGGGTTTTAGGAGGGTTTTTGCGCATGTGGCTCCTATCTTCTTTGAACGTGGCATTGCCAAGCCTGAGACTAAGGAGATCTCGAGTTTAAGTGTGGAACCTTGCGAATGTGAGGAGCTCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200387.p1 GENE.R_Transcript_200387~~R_Transcript_200387.p1 ORF type:complete len:181 (+),score=27.71 R_Transcript_200387:89-631(+)
MNSNLVQLRTPSKIHPLHQNPRTPSHLISISPTKPIIVKTTTTSINLGLRSSVANTTTNKYIYQATPTNHQTVMVASSSSSLSVSDGQYKPIQLDDVPDFDKVVSSDGLISICGFGSLLSERSARSTFPELINFRVGRLKGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCECEELS*

Click here to download the sequence:
Link to NCBI Protein BLAST