Transcript Information: R_Transcript_200390.p1


Annotated TAIR IDAT5G07040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2190344-2190823 | Forward length=159
E-Value5.9E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50702669318663
Replicate 20.38882037807959
Replicate 30.42419884437319
Condition 2: 8 Hour
Replicate 10.4534419434675
Replicate 20.6211356066996
Replicate 30.84035234353643
Condition 3: 24 Hour
Replicate 10.63771686743623
Replicate 20.30632304014691
Replicate 32.8372950520052


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200390.p1 GENE.R_Transcript_200390~~R_Transcript_200390.p1 ORF type:5prime_partial len:216 (+),score=-10.03,zf-RING_2|PF13639.2|2.9e-13,zf-rbx1|PF12678.3|7.9e-09,zf-RING_11|PF17123.1|8.8e-09,zf-RING_11|PF17123.1|5.8e+03,zf-C3HC4_2|PF13923.2|3.3e-07 R_Transcript_200390:1-648(+)
CTTTTCTCTGAATTCACACTTCTTCACTCACTCCCACACCAACTTTCATTTATTAATACTTTTTCTCATGATTTCATGTCAACAACACCAAGTCCAACTCCAACCCCACCCGCCTTACCCATCACCGCAGCCGCTGCTGCCACCACCGCCGTCGGCCTCGGCTACGGCATCGCCATCGCGGTCAGCATCCTCGTCCTCATCTCCACCATCATGCTCGCCTCCTACGTCTGCGTCCGCTCCAAGTCCGGTGGCCACCGCACCGATGCGGACGCAACCAGCGACGACAACCACCACCACCGCCGCCATCCGGCCCAGCCCACTATAAGCGGGCTCCCGGGCCCAATGCTGGCGAAGGTGTGCTGGGACATGCAGCCCAAGAAGGGCCCCACGTACCCGGAGCTAGTGTTGGGAGAAAGCAAGAGGCTGCCGAAGCCCAACAACGGCCCATGTTCAATATGCTTGTCAGAGTACCGGCCCAAAGATACTATAAGGTGTATGCCAGATTGTAATCATTGCTTTCATGTATCTTGTATTGATCAGTGGCTCCGGATGAGCCCCACGTGTCCCGTTTGTCGGAGCTCGCCGGCACCGTCGGCGACCACTACTCCGTTGTCGGAGTTGGTACCTCTGGCGTTTCATTCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200390.p1 GENE.R_Transcript_200390~~R_Transcript_200390.p1 ORF type:5prime_partial len:216 (+),score=-10.03,zf-RING_2|PF13639.2|2.9e-13,zf-rbx1|PF12678.3|7.9e-09,zf-RING_11|PF17123.1|8.8e-09,zf-RING_11|PF17123.1|5.8e+03,zf-C3HC4_2|PF13923.2|3.3e-07 R_Transcript_200390:1-648(+)
LFSEFTLLHSLPHQLSFINTFSHDFMSTTPSPTPTPPALPITAAAAATTAVGLGYGIAIAVSILVLISTIMLASYVCVRSKSGGHRTDADATSDDNHHHRRHPAQPTISGLPGPMLAKVCWDMQPKKGPTYPELVLGESKRLPKPNNGPCSICLSEYRPKDTIRCMPDCNHCFHVSCIDQWLRMSPTCPVCRSSPAPSATTTPLSELVPLAFHSR*

Click here to download the sequence:
Link to NCBI Protein BLAST