Transcript Information: R_Transcript_200391.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value3.8E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.0841150274411
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.45135234925798
Replicate 20
Replicate 30.083647975209157
Condition 3: 24 Hour
Replicate 10.10579634667145
Replicate 20
Replicate 30.10086499855713


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_200391.p1 GENE.R_Transcript_200391~~R_Transcript_200391.p1 ORF type:5prime_partial len:217 (+),score=-10.65,zf-RING_2|PF13639.2|2.9e-13,zf-rbx1|PF12678.3|8e-09,zf-RING_11|PF17123.1|8.8e-09,zf-RING_11|PF17123.1|5.8e+03,zf-C3HC4_2|PF13923.2|3.4e-07 R_Transcript_200391:1-651(+)
CTTTTCTCTGAATTCACACTTCTTCACTCACTCCCACACCAACTTTCATTTATTAATACTTTTTCTCATGATTTCATGTCAACAACACCAAGCCCAACTTCAACCCCACCACCCTCACCCTTCATCGTCACCGCTGCCGCTGCCACTACGGCCGTCGACCTCGGCTACGGCATCGCCATCGCGGTCAGCATCCTCGTCCTCATCTCCACCATCATGCTCGCCTCCTACGTCTGCGTCCGCTCCAAGTCCGGTGGCCACCGCACCGATGCGGACGCAACCAACGGCGTCAGCACCAACCACCGCCTCCAAGCATCCCAGCCCGCTATAAGAGGGCTCCCGGGCCCAATGCTGGCGAAGGTGTGCTGGGACATGCAGCCCAAGAAGGGCCCCACGTACCCGGAGCTAGTGTTGGGAGAAAGCAAGAGGCTGCCGAAGCCCAACAACGGCCCATGTTCAATATGCTTGTCAGAGTACCGGCCCAAAGATACTATAAGGTGTATGCCAGATTGTAATCATTGCTTTCATGTATCTTGTATTGATCAGTGGCTCCGGATGAGCCCCACGTGTCCCGTTTGTCGGAGCTCGCCGGCACCGTCGGCGACCACTACTCCGTTGTCGGAGTTGGTACCTCTGGCGTTTCATTCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_200391.p1 GENE.R_Transcript_200391~~R_Transcript_200391.p1 ORF type:5prime_partial len:217 (+),score=-10.65,zf-RING_2|PF13639.2|2.9e-13,zf-rbx1|PF12678.3|8e-09,zf-RING_11|PF17123.1|8.8e-09,zf-RING_11|PF17123.1|5.8e+03,zf-C3HC4_2|PF13923.2|3.4e-07 R_Transcript_200391:1-651(+)
LFSEFTLLHSLPHQLSFINTFSHDFMSTTPSPTSTPPPSPFIVTAAAATTAVDLGYGIAIAVSILVLISTIMLASYVCVRSKSGGHRTDADATNGVSTNHRLQASQPAIRGLPGPMLAKVCWDMQPKKGPTYPELVLGESKRLPKPNNGPCSICLSEYRPKDTIRCMPDCNHCFHVSCIDQWLRMSPTCPVCRSSPAPSATTTPLSELVPLAFHSR*

Click here to download the sequence:
Link to NCBI Protein BLAST