Transcript Information: R_Transcript_2004.p1


Annotated TAIR IDAT5G11880.1
Annotated Gene NamePyridoxal-dependent decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3827806-3829942 | Reverse length=489
E-Value1.7E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.491779469019
Replicate 256.259863792961
Replicate 369.138388525507
Condition 2: 8 Hour
Replicate 159.103811941626
Replicate 261.775904802626
Replicate 375.294206325946
Condition 3: 24 Hour
Replicate 190.108229179731
Replicate 283.523668050117
Replicate 394.16596681726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2004.p1 GENE.R_Transcript_2004~~R_Transcript_2004.p1 ORF type:complete len:493 (+),score=115.33,Orn_Arg_deC_N|PF02784.12|5e-48,Orn_DAP_Arg_deC|PF00278.18|5.3e+03,Orn_DAP_Arg_deC|PF00278.18|6e-16,Ala_racemase_N|PF01168.16|5.3e-07 R_Transcript_2004:203-1681(+)
ATGGCGGCTACACACCTTCTCTCTCAATCAACAACAATCCCTAAAACCCTAAACCTCACACCAAACTCCAAAACCCCATTTCTCCCAAAACCCTTTATCACCACCCTTCACAAAAAACCCACCTCCCTAAAACCCTTAACTCTCAAGGCAGTCCTTTCTCAGAGCAGCCCAGCTACAAAGATTGCAACTTCTGACCCCAAAACTGGCAATTTCAAGCATTGCTTCACAAAAGAGCAAGATGGGTATTTGTATTGTGAAGGCCTTAAGGTGCAGGAAATCATGGAGAATGTTGAAAAGAGGCCATTTTATCTTTATAGTAAACCCCAGATAACTAGGAACTTTGAAGCTTATAAGGATGCCCTTCAAGGGTTGAGATCAGTTATTGGGTATGCTATCAAGGCTAATAATAATTTGAAGATTTTGGAGCATTTGAGGGGGTTGGGTTCTGGGGCTGTTCTTGTTAGTGGTAATGAGCTCAGGCTGGCTTTGGCTGCAGGGTTTGATCCCACCAAGTGTATTTTCAATGGGAATGGGAAGTTGCTGGAGGATTTGGTCCTCGCAGCTGAGAGCGGTGTTTTTGTAAACGTGGACAGTGAGTTTGACTTGGACAACATTGTTGCAGCTGCTAGAATTGCAGGGAAAAAAGTGAATGTGTTGCTTCGCATTAATCCTGATGTTGATCCTCAGGTCCATCCTTATGTAGCCACTGGTAATAAGAACTCCAAGTTTGGAATTAGAAATGAGAAATTACAATGGTTTCTAGATGCTGTGAAGGCACATCCCAATGAGTTGAAGCTGGTTGGAGCACATTGTCATCTTGGGTCAACAATCACCAAGGTTGACATTTTTAGGGATGCAGCTGTCCTCATGGTGAACTACATAGACCAAATTCGTGAGCAAGGTTTTGAGATTAGTTACTTAAACATTGGAGGTGGTTTGGGAATAGACTATTATCACGCTGGTGCTGTCCTTCCTACACCCAGAGATCTCATTGACACTGTACGGGAACTCGTCCTATCACGAGATCTCAACCTTATCATTGAGCCTGGAAGATCACTTATTGCAAATACTTGTTGTTTTGTCAATCGTGTCACTGGTGTCAAAACTAATGGCACAAAGAACTTTATTGTGATTGATGGAAGCATGGCTGAACTTATCCGACCAAGTCTGTATGATGCTTATCAACATATAGAGCTAGTTTCTCCTACTCCACCAGATGCAGAGGAATCCACTTTTGATGTGGTGGGTCCTGTCTGTGAGTCAGCTGATTTCTTGGGCAAGGAGCGCAAACTTCCCACTCCTGAGAGGGGAGCTGGATTGGTGGTTCATGATGCGGGTGCCTATTGCATGAGTATGGCCTCTACTTACAATCTCAAGATGCGCCCACCGGAATACTGGGTTGAGGAAGATGGATCGATTGCCAAGATCCGGCATGGGGAGACATTCGAAGACCATTTGAGATACTTTACCGGTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2004.p1 GENE.R_Transcript_2004~~R_Transcript_2004.p1 ORF type:complete len:493 (+),score=115.33,Orn_Arg_deC_N|PF02784.12|5e-48,Orn_DAP_Arg_deC|PF00278.18|5.3e+03,Orn_DAP_Arg_deC|PF00278.18|6e-16,Ala_racemase_N|PF01168.16|5.3e-07 R_Transcript_2004:203-1681(+)
MAATHLLSQSTTIPKTLNLTPNSKTPFLPKPFITTLHKKPTSLKPLTLKAVLSQSSPATKIATSDPKTGNFKHCFTKEQDGYLYCEGLKVQEIMENVEKRPFYLYSKPQITRNFEAYKDALQGLRSVIGYAIKANNNLKILEHLRGLGSGAVLVSGNELRLALAAGFDPTKCIFNGNGKLLEDLVLAAESGVFVNVDSEFDLDNIVAAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDQIREQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCFVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPDAEESTFDVVGPVCESADFLGKERKLPTPERGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSIAKIRHGETFEDHLRYFTGL*

Click here to download the sequence:
Link to NCBI Protein BLAST